Shewanella psychrophila: Sps_00420
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Entry
Sps_00420 CDS
T05063
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07660
two-component system, OmpR family, response regulator PhoP
Organism
spsw
Shewanella psychrophila
Pathway
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
spsw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sps_00420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_00420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spsw02022
]
Sps_00420
01504 Antimicrobial resistance genes [BR:
spsw01504
]
Sps_00420
Two-component system [BR:
spsw02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Sps_00420
Antimicrobial resistance genes [BR:
spsw01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Sps_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
AQS35625
UniProt:
A0A1S6HJD3
LinkDB
All DBs
Position
complement(442111..442785)
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AA seq
224 aa
AA seq
DB search
MRILVVEDDPILSHHLKVQLSELGNQVQVALTAKEGFYQATNYPIDVAIVDLGLPDQDGM
SLIQSLRDEGLKAPILILTARVNWQDKVEGLNAGADDYLVKPFQKEELVARLDALVRRSA
GFVKPQITSGKLELDLAAKQLSMNGVPMEITAFEYLILEYLMRHCHEVVAKQRLLDVIYG
DKEGDPNTIEVMVSRLRKKLTKEGLENPIATIRGQGYKFNLPCS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttggttgttgaagacgatcctatcttgtctcaccatttaaaggtgcaactg
agtgaactagggaatcaggttcaagttgcattgaccgccaaagagggattctatcaggca
accaattatcccatagatgtcgccattgtcgacttaggtttaccggatcaagatggcatg
agcttgattcaaagtctacgtgatgaggggctgaaggccccaatccttatcttaaccgcc
agagtcaattggcaagacaaggtagaaggcctcaatgctggtgccgatgattatctggtt
aaacccttccagaaagaagaattagtcgcgcgtttagacgccttggttagacgcagtgca
ggttttgtgaaaccccaaatcaccagtggtaaactggaactggatctcgccgcgaaacag
ctctcgatgaatggtgtccccatggagatcactgcttttgaatatctcatactcgagtac
ctgatgcgccattgtcatgaagtcgttgctaagcagcgtctgttagatgtgatctatggc
gataaagagggtgaccccaataccatcgaagtcatggtatccagactccgaaagaagctc
accaaagaggggctggaaaatcctattgctacgatccgcggtcaaggttacaagttcaac
ttgccatgcagttaa
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