Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA2844
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Entry
SPA2844 CDS
T00219
Symbol
ygdE
Name
(GenBank) conserved hypothetical protein
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spt03009
]
SPA2844 (ygdE)
Enzymes [BR:
spt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
SPA2844 (ygdE)
Ribosome biogenesis [BR:
spt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPA2844 (ygdE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
MIT_C
Motif
Other DBs
NCBI-ProteinID:
AAV78692
UniProt:
Q5PEK5
A0A735JYI2
LinkDB
All DBs
Position
complement(2950395..2951495)
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AA seq
366 aa
AA seq
DB search
MNKVVLLCRPGFEKECAAEITDKAGKREIFGFARVKENAGYVIYECYQPEDGEKLISELP
FSSLIFARQWFVVGELLQHLPPEDRITPVVGMLQGVVEKGGELRVEVADTNESKELMKFC
RKFTVPLRAALRDAGVLTNYETPKRPVVHVFFIAPGCCYTGYSFAHNNSPFYMGIPRLKF
PSDAPSRSTLKLEEALHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVYSVD
NGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVTALMAQWLVNGWCRE
TIFNLKLPMKKRYEEVSHNLAYLQAQLDEHGVNAQIQARQLYHDREEVTVHVRRLWAAVG
GRRDER
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagttgtcttgctctgccgtccggggtttgaaaaagagtgcgctgcagaaatt
accgataaagcgggaaaacgggaaatatttggttttgcacgcgtaaaagagaacgcaggc
tatgtcatttatgaatgctaccagccggaagatggcgaaaagctgatttcagaactgccg
ttcagttcgctgattttcgcccgccagtggtttgtggtgggtgaactgctgcaacattta
ccgccggaagacagaattacgccggttgtcggcatgttgcagggcgtagtggaaaagggc
ggcgagctgcgagttgaagtcgccgacaccaatgaaagtaaagaactgatgaagttctgc
cgcaaatttacggtgccgctgcgcgcggctttgcgtgatgcgggcgtattgacgaattat
gaaacgccgaagcgtccggtcgttcatgtcttttttatcgcgccaggatgctgctatacc
ggttattcgttcgcgcataacaattcaccgttttatatgggcatcccgcgtttgaagttt
ccgtctgatgcgccgagccgctcaacgctgaaactggaagaggcgctccacgttttcatc
ccggaagatgagtgggatgaacgtctggcgaacggcatgtatgcggtggatttgggcgcc
tgtcccggcggatggacgtaccagttagtgaagcgcaatatgtgggtctactccgtagat
aacggcccgatggcgcaaagcctgatggacaccggacaggtgacctggttgcgtgaggat
ggcttcaggtaccgtccgaaccggaataatatttcatggatggtctgcgatatggtggag
aagccggccaaagtcaccgcgttaatggcgcagtggctggtgaacggctggtgtcgggag
acgatttttaaccttaaactgccgatgaaaaaacgctatgaagaggtgtcgcataacctg
gcgtatcttcaggcgcagttggatgagcatggcgttaatgcgcagatccaggcacgtcag
ctttatcacgatcgcgaagaggtgacggtacacgtgcgtcggttgtgggcggctgttggc
ggacgtcgcgacgagcgataa
DBGET
integrated database retrieval system
