Sphingobium sp. TA15: Sj15T_12460
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Entry
Sj15T_12460 CDS
T11324
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spta Sphingobium sp. TA15
Pathway
spta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sj15T_12460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_12460 (nth)
Enzymes [BR:
spta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Sj15T_12460 (nth)
DNA repair and recombination proteins [BR:
spta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sj15T_12460 (nth)
Prokaryotic type
Sj15T_12460 (nth)
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SSDB
Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
BDD66225
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Position
1:1249339..1249989
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AA seq
216 aa
AA seq
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MNKDRIFDFFSRLAEANPAPRTELEYDNDYQLLVAVVLSAQATDVGVNKATRALFREVRT
PQQMVDLGEEGLKAHIKTIGLFNAKAKNVIALSEILVRDFGGEVPQDRDILTTLPGVGRK
TANVVMNTAFGQETFAVDTHIFRVGNRTGLAPGKTPLAVELKLEKRVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPGAKP
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggacaggatattcgactttttcagccgccttgcggaggccaatccggcccct
cgcacggaactggaatatgacaatgactatcagcttctggtggcggtggtcctgtcggct
caggccacggacgtcggcgtcaacaaggcgacccgcgccctgtttcgggaggtccgcacc
ccgcaacagatggtcgacctaggggaagagggcctgaaagcccatatcaagacgatcggc
ctgttcaacgccaaggccaagaacgtcatcgccctgtcggaaatattggtccgcgatttc
ggcggagaagtgccgcaggaccgcgacatcctcaccaccctgcccggcgtcgggcgcaag
accgccaatgtcgtcatgaacaccgccttcgggcaggagacgttcgcggtcgacacccat
atcttccgcgtcggcaaccgcaccggcctggcgcccggaaagacgccgctggcggtcgaa
ctgaagctggaaaagcgcgtccccggccccttccgccgcgatgcgcaccactggctgatc
ctgcatggccgctatgtctgcaaggcgcgcaagcccgaatgctggcgctgcatcgtcgcc
gacctctgccgcttcaagcccaagacgcccgcgcccggcgccaagccctga
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