Strongylocentrotus purpuratus (purple sea urchin): 577806
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Entry
577806 CDS
T01019
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04145
Phagosome
spu04148
Efferocytosis
spu04350
TGF-beta signaling pathway
spu04512
ECM-receptor interaction
spu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
577806
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
577806
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
577806
04148 Efferocytosis
577806
09142 Cell motility
04820 Cytoskeleton in muscle cells
577806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
577806
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
577806
Membrane trafficking [BR:
spu04131
]
Endocytosis
Phagocytosis
Opsonins
577806
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
577806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
cEGF
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
577806
NCBI-ProteinID:
XP_030855692
UniProt:
A0A7M7PSM3
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MEKIRCFSCFVLFIATLLPAIIAQSSYVEFNVLQDVGISAASPGVDLVRGQEENSVAYKI
KPNKGDMAANTIDVQRLGDAMNDEDGFVLVAKVKMGQKARGTVVSLDGHGHTDRLFGLVI
DRKSDSVLMPYSYRRDGVTTQDSLEFSGLNLEDTEDRDWHTFTLDIQGNLAILYADCTRV
GLQIMYGSFVYDVTPDQYSLRLGKGLKGRKDVPDFKGIIEDVKFIFGQRGTRILRLQGCD
IEASSSQSSSSDISPDFGGQSHDSQLSPFGGGHESIPDVGVGVGVGVGVGVGVGVGPLVS
QPNIHPSVHEVETPEQETIAPVPPKMPEVPTVPNTPHTAIEPGVVEGPLNDGSPMNYNLP
SLYLPNSPGSHNFAEPTNGARPMPNMNDVIPNGQCAITCDQISQLRNMVDVLSQGQENIL
TRVTDMDNRIPSQTPPWLDGCFYKNEIRQNFEEWKDDACTTCECNAPAVTCRLIECQPIT
CQNPIIKPGECCPQCPNEEQGWSDWTEWTSCSVTCGSGTMQRGRSCDRMRYPCNGRSVET
RNCIRDSCVSVVDGGWSNWTPWACGITCGVGTETRVRSCNSPPPQNGGARCLGEAFGAGR
EERLCQRDPCPVDGAWGEWSLWTACTHSCDGGNQERYRFCDSPTPAHGGRNCSGIKRQEQ
MCNQRPCPIDGCLSSPCFEGVDCRSSDDGVFQCGPCPVGFRGDGQSCTDVNECLEVLNTC
FHHHSQHRCINKIPGYSCQECPTGYRGNQPNGIGIFHASRYRQQCIPINPCTEGTHDCAP
DAKCTFFGPYSQPQYGCRCRTGYAGDGYACGLDSDLDGRPDVDLDCQGLGDYMHCHKDNC
PRLPNSGQEDSDRDGEGDACDDDDDDDGIRDDRDNCQFTPNRWQGDRDRDKVGDECDNCP
THSNPRQENVDGDEFGDECDDDIDNDGHDNFIDNCPKHANANQDDSDHDGLGDLCDNCPF
DFNPLQIDTDDDNVGDECDTDEDVDGDGHQDNLDNCPDIPNASQKDHDNDGIGDACDPDD
DNDGVTDADDNCRLVFNPSQNDTDENGRGDACESDFDGDGVADIMDACPENSMIQRTDLS
AFQMVPMDPSGASQLEPNWMVRNHGLELVQTINSDPGLAVGYDEFESVEFSGTFYVNTAK
DDDYAGFIFGYQSNHRFYAVMWKQVTQKYWQPDPSPAEATAGLQLKLINSTTGPGEYLRN
AMWHTGDTENQVKLIWSDPNKIGWKDFTAYRWTVQHRPIDGFMQVTAWEGSNVLADSGPL
YDSTLRGGRLGLYCFSQEMVFFSDMEYRCLSDY
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatacggtgtttttcgtgcttcgtactcttcatagcgactctattgcctgca
ataattgcacaatcgtcgtacgttgaattcaatgtccttcaagacgtgggtatctctgct
gcatcacccggggtagatcttgtaagaggacaagaagagaactcggtagcttataagatc
aaacctaacaaaggtgacatggcagctaatactatcgacgtgcaacgtctcggagatgct
atgaacgatgaagatggcttcgtactcgtcgccaaagtgaagatgggtcagaaagctcgt
ggaaccgtagtgtccctagatggtcatggccacacggatagactctttggcttggtgatt
gaccgtaagagtgatagtgtcttgatgccatactcatacagaagggatggtgttactacg
caggattcattggagttctcaggtctgaatcttgaagatacagaggatagagactggcat
accttcacgttagatattcaaggtaacttggcaatcctgtatgctgactgtaccagggtt
ggtctccagatcatgtatggaagctttgtctatgatgtcacacccgatcaatattccctc
aggcttggaaaaggactcaaggggcgaaaagacgtgccagattttaagggtatcatagaa
gatgtgaagtttatctttggtcagcgaggtactcgtattctccgtctacaaggatgtgat
atcgaggccagctccagccaatcgtcaagctcagatatatcaccagatttcggtggacaa
agtcatgacagtcaactctcaccgttcggtgggggacacgaaagcataccagatgttgga
gtcggagtcggagtaggagtcggtgtgggagtaggagtaggagttggtcctttggtcagt
caaccaaatatccacccatcagtccatgaggtcgaaacccctgaacaagaaacaatcgca
cccgtaccccctaagatgcccgaagtcccaaccgttcccaatactccccataccgcgatc
gagcccggagtcgtcgagggaccgctcaatgacggatctccgatgaattacaatctcccg
tcgctataccttccgaacagtcccggatcgcacaatttcgcagagccgacaaacggtgcg
agaccaatgccgaacatgaatgatgtcataccaaatggtcaatgcgctatcacatgtgat
caaatctcgcagttacgaaatatggtcgacgtgctttcacagggacaagaaaatatcctc
accagggtgactgacatggataacagaataccaagtcaaactcctccctggttagatgga
tgtttctataagaatgagatcagacaaaacttcgaggaatggaaggacgatgcctgtact
acctgcgaatgcaatgcccctgctgtgacgtgtcgtttgattgaatgtcaaccaatcaca
tgccagaatcctatcatcaaaccaggagaatgctgccctcaatgtccaaatgaggagcag
ggatggagtgattggaccgaatggacatcttgttcagttacttgtggttctggtaccatg
cagagaggacgctcgtgtgataggatgaggtatccctgtaacggacgaagtgtggagacc
aggaactgcatccgggactcgtgtgtctcggttgttgatggtggttggagtaactggaca
ccatgggcttgtggtatcacatgtggtgtaggaactgagactagagtacgatcctgtaac
tctccacccccgcagaacggcggggcaaggtgtctgggtgaagcctttggagcaggacgt
gaagagagactgtgtcagcgagacccgtgccctgttgatggagcttggggggagtggtcg
ctgtggacggcatgtacccattcttgtgatggtggtaatcaggagaggtatcgattctgt
gatagccccacccctgcacatggtggtaggaattgttcaggtatcaaaaggcaagaacag
atgtgcaaccagagaccatgtccgattgatggatgcctttcaagcccatgctttgaaggt
gttgattgccgtagtagtgatgatggtgtgttccagtgtggcccatgtcctgttggtttc
agaggggatggccaatcatgtacagatgtcaatgagtgtcttgaggttctaaatacatgt
ttccatcatcacagtcaacatagatgtatcaataagatccctggatactcctgtcaagaa
tgcccaactggttaccgtggtaaccaacctaatggtatcggtatcttccatgctagcaga
tacagacagcaatgtatcccgatcaacccatgtacagaaggcactcatgactgtgctcct
gatgctaagtgtacattcttcggaccttatagtcaacctcaatacggatgtcggtgccga
acaggatacgctggagatggatacgcatgtggactagacagtgatctcgatggccgacct
gatgtcgatctcgactgccaaggactcggtgattacatgcattgtcataaggataattgt
cctcgtctgccaaacagtggacaagaagacagcgatcgcgatggggagggagatgcttgc
gatgacgacgacgatgatgatggtatcagagacgacagggataactgtcagtttactccc
aaccgatggcaaggagatcgagatcgtgacaaggttggtgatgagtgtgataactgtcct
actcactccaatccaaggcaagagaacgtcgatggcgatgagttcggtgacgaatgcgat
gacgacatcgataatgacggacacgacaactttatagataactgcccgaaacacgccaac
gctaaccaggatgacagtgatcatgatggtctgggtgacctctgtgataactgtccattc
gacttcaaccctctacagatcgataccgatgatgataacgttggcgatgaatgtgacacg
gatgaagacgtggatggtgacggtcatcaagataatctagataactgtcccgacatccct
aatgctagtcagaaggatcatgataatgatggcatcggtgatgcgtgtgatccggatgac
gataacgatggcgtgaccgatgccgatgataactgtcgtctggtttttaatcctagtcag
aacgataccgatgagaatggacgcggtgatgcgtgtgaatctgactttgatggtgatggt
gtagctgatatcatggatgcttgtcctgagaatagtatgatccaaagaacagatctctca
gcattccagatggtacctatggatccatcaggagcatctcaactcgagcctaactggatg
gttaggaatcatggtctggagctggtgcagactatcaacagtgatccaggattagctgtc
ggctatgacgagttcgagagcgtagagtttagtggtacattctatgtgaacacagcgaaa
gatgatgattatgctgggttcatctttggctaccaatccaatcatcgattctatgctgtc
atgtggaagcaggttacgcagaaatactggcaacctgaccctagccccgctgaagctact
gctggtcttcaactcaagctgattaactcaacaactggcccaggagaatacctgagaaac
gctatgtggcacactggagatacagaaaaccaggtgaagttgatttggagcgatccaaac
aagattgggtggaaagatttcacagcttacagatggacagtccaacacagacccattgat
ggatttatgcaggtgacagcgtgggaaggtagtaatgtattggcagactctggccccctc
tacgactcaacgttacgcggaggacgattgggactatattgcttctctcaggagatggtc
ttcttctccgacatggaatatagatgcctatcagattactaa
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integrated database retrieval system
