Strongylocentrotus purpuratus (purple sea urchin): 578285
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Entry
578285 CDS
T01019
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spu04054
]
578285
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
578285
Pattern recognition receptors [BR:
spu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
578285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
ResIII
DEAD
RIG-I_C-RD
Helicase_C
SWI2_SNF2
PhoH
AAA_22
IstB_IS21
Death
AAA_30
AAA
Ku_PK_bind
NPHP3_N
Zot
Yippee-Mis18
DUF87
AAA_19
Motif
Other DBs
NCBI-GeneID:
578285
NCBI-ProteinID:
XP_783556
UniProt:
A0A7M7RAR3
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAKRSVLSDDELLSLAEEFTLEKDFFKLGVKLNFPILEINKSLKECKDDVFRATVMSLHH
WRDLQRPGTDVRSKLYTILKELGHHKAADVLVTGDDDFDKKSLLRTVEVCTPSESSASIT
KNMDLQSDLADEVSMVSSAMSQSDYSMSVKKDSKFDESGSGSEKPSEPRSTGLTDYLDQM
NVDRTPDPSVDVGVAGWVNKTGAAMQPRIGAPGADRLTDIRPSIGHLETLRLEDYQVELA
EPALQGHNTCVVAPTGSGKTYVAVAVAQEVLRKSPGKKVIFVVNQVPLVHQQSTVFKKYI
KDVAYICGDHGQPQITRLPMDQVLRKNDVVVLTAQILVDALTKGQVSFNQIGIIVFDECH
ETKKDSQYNAIMAKYMEQKLKNKKPLPQILGMTASLGVGNARSDKIAIQYMLKMCANMDV
VKLSTVKKHKESLEKVVNKPEEGLHVVTSRTEDSFAEEIQDLMYQVFKYINSSTGSAVLN
TTVEKLSSLRSSNHSRENFSHVLCKLKKEIAENTQSKDLQLGLMTCAQYLKEYSSALAIH
ETARTKDALQCLLEFIKEKSSKAVTTNTEKILIRTFQEKQQELERISMSPKSPNNPALDE
LQNLIERDIVTCRTQENNGPFRAILFTQTIASTWALQKWVMETDSLKDLHPEVLVGCRNP
GMNLRHQTDVLDNFRNGVHKLLIATSVIQQGIDIPACNFVYRYNYITDAVARIQARGRTR
KPGGRFDLVVHDYRGLDGKDKLSKEQEQIMQQATDAVSSLSIEQMILGTAEYQQHRNVQI
FNQQRPKPFDQCNHSYHCKHCDALVCHSADIRIVPGGHHVVIHRQIFSKIRIVASRGVGQ
DPGHWSSVEHAKKEIRCADERCDTKLGSILKCNNRMLLAFSIKSLRLRSEASKTKTNKSW
GSLPFIFQKVPVTEASFGFNDIPGTVA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagaagcgtactatccgatgatgaacttctctcgcttgctgaagaattcact
ctggaaaaagatttcttcaagcttggagtgaagctgaactttcctatccttgagatcaat
aaatctctgaaagagtgtaaggatgatgtattcagagcaactgtaatgtcccttcatcat
tggagggatcttcaaagaccaggaacagatgtgagatccaagctttataccatcttaaag
gaacttggtcatcacaaggctgcagacgtgctagttacaggtgatgatgattttgacaag
aagagtcttctaaggacggtagaggtctgcacaccttcagagagttcagcaagcattaca
aagaacatggacctccagagtgatctagctgatgaagtcagtatggtttcatccgccatg
tcacagtccgattactccatgtcggtcaagaaagacagcaaatttgatgaatcaggatca
ggatcagaaaagcccagtgagccaaggagtactggtttaacagattatcttgatcaaatg
aatgttgatcgtacaccagatcctagtgtagatgtaggtgttgcaggatgggtcaataaa
acaggagctgccatgcaaccaaggataggagcacccggtgctgacagactaacagatatc
cgtccatctattggtcatctggaaaccttgagacttgaagactaccaagtagaactggcc
gagcctgctcttcagggccataatacatgtgtagtagctcctactggttcagggaagaca
tatgttgctgtggctgtagctcaggaggtcctcaggaaatcaccagggaaaaaggtcatc
tttgttgtaaaccaggtacctcttgtccaccagcagagtacagtgttcaagaaatacatc
aaagatgtggcctatatatgtggtgatcatggccagcctcaaataacacgccttcctatg
gatcaagtcttgaggaagaacgatgtagtggttctaacagcacagatacttgtagatgcg
ttgaccaagggacaggtgtcattcaaccaaattggaatcatcgtctttgatgagtgccac
gagacaaagaaagatagtcaatacaatgctataatggcaaagtacatggagcaaaaactg
aagaataagaaaccacttcctcagattcttggcatgacagcatctctaggagtaggtaac
gcacgttctgacaagattgccattcaatacatgctcaagatgtgtgctaacatggatgta
gtgaagctatctaccgttaagaaacataaagagagcttggaaaaggttgtaaacaagcct
gaagaaggattgcatgtagtgacaagcagaaccgaggattcatttgcagaagaaatacag
gatctcatgtatcaggtcttcaagtatatcaactcaagcacaggaagcgctgttctcaac
actacggttgagaagctttccagtctacgaagcagtaaccattccagagagaacttcagc
catgttctgtgcaagctgaagaaggagatagcagagaatactcaatctaaggatttacag
cttggtttaatgacatgtgcacagtatctaaaggaatacagcagtgctctagccatccat
gaaacagctcggaccaaggatgctttacaatgtctcctagagttcatcaaagaaaagagc
agtaaagctgtcaccacgaacacagagaaaatactcattcgaacattccaagaaaagcaa
caagaactggagagaatttcaatgagtcctaaatcaccaaataacccagcacttgatgag
cttcagaacctgatagaaagagacatagtgacatgtcggacccaggagaataatggtcca
ttccgggctatcctcttcactcagaccattgcatctacatgggctctccagaaatgggtc
atggagacagattccctcaaagatcttcatccagaggtgttagttggctgtagaaaccca
ggtatgaacttacgtcatcagacagatgtcctagacaactttcgtaatggtgtgcacaag
ctgctcatagcaacctcggtcattcaacaaggcattgatatcccagcatgcaactttgtc
tacaggtacaactacatcactgatgctgttgcacgtattcaagccagaggtcgaacgcgt
aaaccaggaggtcgttttgatctggtagttcatgattacagaggactggatgggaaagat
aaacttagtaaagaacaggaacagatcatgcagcaagctactgatgcagtttcatcactt
tctattgagcagatgatacttgggactgctgaataccagcaacatcgcaatgtacagatc
ttcaaccaacagcgacccaaaccatttgatcagtgcaaccacagttaccattgtaagcat
tgtgatgctctagtttgccattcagcggatatcaggattgtacctggtggtcatcatgtg
gtcattcatcgtcagatcttcagcaagatcaggattgtggcttcaagaggagtcggtcaa
gatccaggacactggtcatccgttgaacatgccaagaaagaaatcagatgtgcggatgag
cgatgtgacaccaagcttggtagcattttaaagtgcaataaccggatgctacttgcattc
tccatcaagtcattaagactcagaagcgaagcaagcaagaccaagactaacaagagttgg
ggttcacttccgttcatcttccaaaaagtaccagtgacagaggctagctttggatttaat
gacatccctggcactgtggcatag
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