Strongylocentrotus purpuratus (purple sea urchin): 579989
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Entry
579989 CDS
T01019
Name
(RefSeq) probable E3 ubiquitin ligase complex SCF subunit sconB
KO
K10260
F-box and WD-40 domain protein 7
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
579989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
579989
04121 Ubiquitin system [BR:
spu04121
]
579989
Membrane trafficking [BR:
spu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
579989
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
579989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
F-box-like
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_like
Beta-prop_IFT140_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR54
Beta-prop_NOL10_N
F-box
WD_LRWD1
Beta-prop_NWD2_C
DUF6923
DUF4508
Beta-prop_Vps41
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
579989
NCBI-ProteinID:
XP_800063
UniProt:
A0A7M7PH44
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MDVLPPVSSNPLAADPTPVMHISLPGNADYGDGAHNNDNGQNGVEDEKEERGGSGFQIGD
ILLSGRSQSGGGGEGDGAVMLADWHAFRGRDIESDNTMEFNRQVDHVNIWLDKWNHNQRC
LILEGILQRSNYTQYNFLWTTLQPALHRDFMYTARQHYPEYHFEPISSHTSRETRTKRAV
RNYYHAHSAHLQRKTDVKRLNVQHILPVIMSAPSEEPKEVSFKSGWDRLRPTNSMPLVKL
PSVSHSKTFDHPLSKSAPVSPMRDDQPIRRHMQDHDGHSIPRKRVARNERKRRGYNPVDD
ANVPLLTKALTDVQLTWNRPTMSGNRADRLPPIEPIPVESWQLFHWYAECWNDVQRNEFL
HKLLKKLDQRQLYFLSTHSALKQSRDFITLLPLPLALRIMGYLSPRWLLVAAQVCKMWNR
RASHDQIWKDKCSQVAIEIPLPETPFQWKKIYRDNVFLRFNWDEGKTKNVDVRGHASKVH
CVTFDGEYRIASGSADKTVKVWDIRTGACIQTLKGHQKGVWCLRFFTKHLLISASYDATI
KVWNLRKGACARTLLGHEGAVWSMALKKNYLATASQDRTVKLWDLSTCELKHTLVGHGQA
VFCVDMDEECTMVISGSADKSVRIWSVETGRHTRVIRISQTTSVMALNYHQGYFVCSVGE
IVSLWRLDTATCVKTFEEHEKRVETLSLRISKTTYPDKPQGLLVSAGQDGMVKYWDLEKD
SSWHSMKSRKGSHISSIFCDKTKIIAACSDFRIRIWNFHT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcttaccccctgtgtcttccaatccgctggcagccgacccgactcccgtcatg
cacatatcactgccagggaatgctgattatggagatggtgcacataacaatgacaatggc
cagaacggggtagaggatgagaaagaggagaggggaggctcgggattccaaataggagat
atcctgttgtcggggagaagccagagtggaggaggaggagagggggatggagcggtgatg
ttggctgactggcatgcgttcagagggagggatatcgagagtgataataccatggagttc
aacagacaggtggatcacgtcaatatctggctggacaagtggaatcacaatcagcgctgt
ctaatattagaaggaatattgcagcgtagcaactacacacaatataacttcctatggacc
acccttcaaccagcccttcacagagacttcatgtacactgccagacagcattaccctgag
tatcactttgagccaatcagcagtcatactagcagggagaccaggactaagcgagccgtc
aggaactattatcacgctcatagtgcacatctacaaaggaagaccgatgtgaagagatta
aacgtccagcacatccttcctgtcatcatgtctgctccttctgaggaacctaaggaagtg
tcattcaagtctggctgggacagactcagaccaaccaacagcatgccacttgtcaagctg
ccctctgtctctcattccaaaacctttgaccatcctctcagcaaatcagctccagtctct
ccgatgagggatgatcagccaatcagaaggcatatgcaggaccatgacggccattccatt
ccaaggaagagggtggcaagaaatgagaggaaacggagaggctacaatcctgtggatgat
gcgaacgttcctctgttgaccaaggcactgaccgatgtccagctgacctggaatagaccc
actatgtctggtaacagggctgataggttacctcccattgaacccattcctgtggaatcc
tggcaactctttcattggtatgcagaatgctggaatgatgtccagagaaacgagtttctt
cacaaactcttgaagaagttggatcagcggcagttgtatttcctatctacgcactctgca
ctgaaacagtcacgtgatttcatcaccctgcttcccttaccgctggcgctaagaatcatg
ggatacctgtcgccaagatggctgctggtggcagcccaagtctgtaagatgtggaaccgt
cgggccagtcatgaccaaatatggaaggacaagtgttctcaggtcgccattgaaattcct
cttccggagacaccatttcagtggaagaagatctacagagataatgtgtttctgaggttt
aactgggatgagggcaagaccaaaaatgtggatgtcagaggtcatgcttccaaagtgcat
tgtgtaacgtttgatggtgagtatcgtattgccagtgggagcgcagataagactgtcaag
gtgtgggacatcagaacaggtgcttgcatccagacactcaaaggacatcagaagggtgta
tggtgtctgcgcttcttcaccaagcacctcctcatcagtgcgtcctacgatgcaaccatt
aaggtgtggaacctgaggaagggggcgtgtgctcgcaccctcctgggtcacgaaggagcc
gtctggtccatggcgctgaagaagaattaccttgccacagcatcacaagacagaaccgtc
aaattatgggacctgagcacctgtgagctgaagcacaccctggtaggtcatgggcaagca
gtgttctgtgttgacatggatgaggagtgtactatggtgatatcaggatcagctgataag
agcgtgagaatctggagtgtagagacaggccgtcacacacgagtcatccgcatcagccaa
acgacatccgtcatggctctgaactatcatcagggatactttgtctgttcagttggagag
attgtatcgctatggcgactggatactgccacgtgtgtgaagacatttgaggagcatgag
aaaagagttgagactctgagtctacgaatcagtaagacaacctaccctgacaaaccgcag
ggtctactggtcagtgctggtcaagatggaatggtcaaatactgggacctagaaaaggat
agtagttggcactcgatgaagtctaggaagggcagtcacattagtagcatcttctgtgac
aagaccaagatcatcgcagcatgctcagacttcaggatcaggatctggaatttccacaca
tga
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