Strongylocentrotus purpuratus (purple sea urchin): 584052
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Entry
584052 CDS
T01019
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04120
Ubiquitin mediated proteolysis
spu04140
Autophagy - animal
spu04144
Endocytosis
spu04517
IgSF CAM signaling
spu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
584052
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
584052
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
584052
04140 Autophagy - animal
584052
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
584052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spu04131
]
584052
04121 Ubiquitin system [BR:
spu04121
]
584052
Enzymes [BR:
spu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
584052
Membrane trafficking [BR:
spu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
584052
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
584052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
TRAFD1-XIAF1_ZnF
zf-Nse
CCDC39
Motif
Other DBs
NCBI-GeneID:
584052
NCBI-ProteinID:
XP_789029
UniProt:
A0A7M7RCP9
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MPVSRPASRRSSVRGFYDRFDTRRERRYQRFGVGFGRGTFDNFTGIDGAMVLEEDNPIGN
GATYYDTEGAATATAVSPTPDPMSTHDDGSEVSAVCGYEAQFETPLDKKYVCPVCLSALR
DPLQTKCGHRFCKVCLTLASGPGNVAKCPLDKLFFDVRSEVFEDVAMKREVLSLLVLCTN
LDCEWKGELRLLEEHTDDCPHLLILCSNGCLTHHKRMDADEHHNNCPARLLECTFCQQSV
AYKSLNQHQLLLCPRYAIDGPLCGKVGIIREDMPKHTDHKDGDCPKSMVPCKFGAMGCHV
QVRRCDLQLHSQESQGLHLDLVLVHYTTQTEHVQEQACTIHELQETCSRLVGQNADADRK
IRELSGDVSSLRNELSLATNTNYTGHLQWKVQISSRDFTAPVLSPPFYTSPVGYKLRLCL
ELRGHVTRSDSYTSIFIMLCKGEHDRNLYFPFSAVCSLTLFDQSDCENHLNTTITCQKMP
RPHEVSSTMQRRGRLQFMKTDTLINGRFCKTGTLFFQARVNTLPTAHTT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaagtcgtccggcaagtcgtcgaagttcggttcgtggattctatgatcgcttt
gatactcgacgagaacgcagatatcaacgctttggtgtgggatttgggcgtggcactttc
gacaatttcactgggatagacggagctatggtgctggaggaagataaccccatcggaaat
ggagcgacatattacgatactgaaggagcggcgacggcaactgccgtctccccgacacca
gaccccatgtcgacccatgatgatggctcagaggtgtctgcagtgtgcggatatgaggct
cagttcgagactccactggataagaagtatgtatgtccggtctgtctgtcagctcttcgt
gatccgttacagactaaatgtgggcacagattctgcaaagtatgcttgacgctagcaagt
ggcccgggaaacgttgctaaatgtcctctggataaactcttctttgatgtccgcagtgaa
gtgtttgaagacgttgccatgaagagagaagtattatcattattagtcctctgcaccaat
ttggactgtgaatggaagggagagcttcggttattagaggagcacaccgatgattgtccc
catttgctgatactgtgttctaacggatgcctcacacatcacaagagaatggatgcagat
gagcaccataataactgccctgcaaggctgttagaatgtacattctgtcagcaaagcgta
gcatataaatctctcaatcaacatcaactccttctgtgtcccaggtatgctatagacggc
cctctgtgtgggaaggtcggcataatacgagaggacatgcccaagcacacggatcataaa
gatggagactgtcctaagtccatggttccatgcaagtttggcgctatgggatgccatgtt
caggtaagacgatgtgatcttcaactccatagccaggaatcacaaggtctccacctagat
ctcgtgttagttcactacaccacacagaccgagcatgtccaggaacaggcatgcactata
cacgagctgcaggagacctgctccagactggtcggacagaatgcagatgctgacaggaaa
ataagagagctctctggagatgtcagcagtttaagaaacgaactttcactggcaacgaac
accaattacacaggccaccttcaatggaaggtccagatatcttcccgtgacttcactgca
cctgtcctgagcccacccttctacacctctccagttggttacaagctccgcctctgcctt
gaattgagaggtcacgtgacgcgttcagactcctatacttccatctttatcatgctgtgc
aaaggggagcacgacaggaacctgtatttcccattcagtgctgtctgtagcctgactctg
ttcgaccaatcggactgcgaaaatcacctgaataccaccatcacctgtcagaagatgcca
cgccctcatgaggtatcgagcaccatgcaacgtcgtggaaggctacagttcatgaagacg
gatactctgatcaatggtcgattctgcaagactgggacactcttcttccaggctcgtgtg
aacaccctccctacagcccataccacatag
DBGET
integrated database retrieval system
