KEGG   Semicossyphus pulcher (California sheephead): 138584302
Entry
138584302         CDS       T10596                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04145  Phagosome
spul04514  Cell adhesion molecules
spul04672  Intestinal immune network for IgA production
spul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:spul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    138584302
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138584302
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    138584302
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138584302
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spul04147]
    138584302
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138584302
  Exosomal proteins of epithelial cells
   138584302
  Exosomal proteins of breast milk
   138584302
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 138584302
NCBI-ProteinID: XP_069512599
LinkDB
Position
Unknown
AA seq 248 aa
MLTCSFFPLLCILFISGAEALFGYGLLRCQFTSPDDVVYLAQIFYNKVLLGGYNSTEGKY
TGYTKKAKEFVDVLNKNPTFLKEEKINLEKCKTHTAFAFEVLSKPVEPSVRLSSVKVAGS
KHPNILVCSAYSFYPKQINVTWLRNGKEATSDVTSTEELPDGNWFYQIHSYLELTPTFGE
KISCKVEHASFQTPRIYEWGSIPESERNKIAVGASGLLLGLVFMCAGIISYLKNRTGRIL
VPQSQPAM
NT seq 747 nt   +upstreamnt  +downstreamnt
atgcttacatgcagcttctttccactgctctgtattctgttcatttcaggagcagaagcg
ctctttggttatggcttgcttcgctgccagtttacttcacctgatgatgttgtttatctg
gcgcaaatcttctacaacaaggtgctcttgggtggttacaacagcactgagggaaaatac
accggctacacaaagaaggcaaaagaattcgtagatgtcctcaacaaaaatcctactttt
ctgaaagaagagaaaattaatttagagaaatgcaagacccacaccgcctttgcatttgaa
gtcctttcaaaaccagtcgagccgtcagtcaggctgagctcagttaaggtggcaggaagc
aaacaccccaacattctcgtctgcagcgcatacagcttctaccccaaacaaatcaatgtg
acttggctcaggaacggaaaagaggcgacatctgatgtgacgtccacggaggagctgccc
gatgggaactggttttaccagatccactcctacctggagctgacgcccacatttggagag
aaaatctcctgtaaggtggagcacgccagcttccaaacgcccaggatttatgagtggggg
tcaatacccgagtctgagaggaacaagatcgctgtcggggcatcagggctgctgctgggt
ctggtcttcatgtgtgctgggataatttcctacttaaagaacagaacaggacggattttg
gtgccacaaagtcagcctgccatgtga

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