Semicossyphus pulcher (California sheephead): 138585427
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Entry
138585427 CDS
T10596
Symbol
otofa
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Membrane trafficking [BR:
spul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138585427 (otofa)
BRITE hierarchy
SSDB
Ortholog
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GFIT
Other DBs
NCBI-GeneID:
138585427
NCBI-ProteinID:
XP_069513844
LinkDB
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Position
Unknown
AA seq
1996 aa
AA seq
DB search
MMALMVHLKTVAHLRGRGDRIAKVTFRGLPFFSRVAENCDEVAHFNETFRWPIASRLDGN
EMLEIQVYNYSKVFSNRLVGTFCMVLQKVAEEGHLELTDTLIDDNNTSIKTSVTIEIRYQ
SMDGTVGVWSDGEFLDVPDDRDGMFAFETDSLLSGQSHGSGTSPGRSLQGSIPTFRKAGK
GVFSAMKLGKIKSSKDDHRRADEPAVLDMEDLDKKAIRLAGTLDPDTISLASVTAVTTNV
SNKRSKPDIKMEPSSGRPVDYQISITVIEARQLIGLNMDPVVCVEIGDDKKYTSMKESTN
CPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGNFKMDVGTVYSQPEHQFY
HKWAILSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKANETDEDEIEGNLLLPEGIPAE
RQWARFYVKIYRAEGLPKMNTTIMANVKKAFIGENRDLVDPYVQVQFAGQKGKTSVQKSS
YEPIWNEQVIFTELFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLPTLG
PAWANMYGSTRQYTLMDEHQDLNEGLGEGVSFRARLLVSIAVEILDTTSPEIISSTEVQV
ETVSNISESATGKMDEFFLFGSFLEATMIDRKIGDKAISFEITIGNYGNQIDGVSKPSSA
KKKKKDGDNEEEESELIQNSSEDEADEDADLVSVSSTPLMKPVITDRNYFHLPYFEKKPC
VYIKSWWQDQRRRLYNSNMMDKIADKLEEGLNDVQEIIKTEKAFPERRLRGVLEELSVGC
SRFVTLANKDVNQAGRTKLDRERLKSCMREMDSMAQQAKQIRTQVKKHTVRDKLKLVQNF
LQKLRFLADEPQHSIPDVFVWMMTNNKRIAYARIPSKDILYSIVDEETGKDCGKVKAVFL
KLPGKKGFGPAGWTVQAKLELYLWLGLNKQRKDFLNGLPNGFEEIKAVKTGPGLQSVPPV
SLVYNMKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLSETLCPTWDQL
LVFDDVELFGEASELRDDPPIIVVEIYDQDTVGKAEFIGRTFAKPTIKMCDEYYGPPRFP
PQLEYYQVFRGNCTAGELLAAFELLQIGQGGRADLPPLEGPTDTEHGPILPVPLGIRPVL
SRYRIEVLFWGLRDLKRINLAQVDRPRVDIECAGRGVQSVLIQNYKKNPNFSTLVKWFEV
DLPENELLHPPLNIRVVDCRAFGRYILVGSHAVSSLRRFIYTTPDKTSNNWATAGDIIVN
MDSDPSIRKMDTVVKLDATSDAVVKVDMTEDDSDKDKKKKKKKKKGGVEEEEETDERMLD
WWSKYFASIETLKETLRAQEAAQAEAEEREDLEIAAEAADFKPDDLLLKGSKTKEKSKEK
KNSKDKKKGQAADGAEKKPVKAKVDELLVYNKELETEYGDFEDWLHTFNLYRGKAGDDDE
HALDDDRIVGRFKGSLCMYKLPVSEEITREAGFDPNMGMFQSIPHNDPIHVLVRVFVVRA
TDLHPADINGKADPYVVIKLGKSEVKDKENYISKQLNPVFGKSFDIEATFPMESMLTVSV
YDWDLVGTDDLIGETKIDLENRFYSKYRATCGISSNYSVHGYNVWRDPLKPSQILAKLCK
DGKIDGPHYGPGGKVKVANRIFMGPTEIEDENGLKKQTEEHLALTVLNHWEEIPRVGCKL
VPEHVETRPLLNVDKPGIEQGRIEMWVDMFPMDMPAPGPAIDISPRKPKRYELRVIIWNT
DEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRFVYPFDYLM
AEEKIVISKKESMFSWDETEYKIPPRLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTA
KQCSLNMIRNEQELPTISIFKQKRVKGWWPFVARDENDEMELTGKVEAELHLVTAEEAEK
SPVGLGRNEPDPLEKPNRPDTTFLWFLSPLKAIRYLVCNRYKWLIIKIVLAMLLLIMLGL
FLYSMPGYLVKKLLGA
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctaatggttcacctgaagacggtcgctcacctccgggggagaggtgacagg
atcgccaaagttacgttcagaggtctgcccttcttcagccgcgtggcagagaactgtgat
gaggtggctcactttaatgagacatttcgatggcccattgccagcaggctggacggaaac
gagatgctggagatccaagtgtacaactacagcaaagtcttttccaacagactggtgggg
accttctgcatggtgcttcagaaggtggcggaggagggacacctcgagctcaccgacaca
ctcatcgacgacaacaacacgtcgataaagaccagtgttaccatagagatcagataccag
tccatggatggcacggtgggagtgtggagtgacggggagttcctggatgttccagatgac
cgtgacgggatgtttgccttcgaaacggacagcttgctgtcaggacagagccacgggtcg
gggacctctcctggacgttccctacagggatccataccgacctttaggaaagcagggaag
ggagttttctcagccatgaagctcggcaagatcaagagctctaaagacgatcacaggaga
gcagatgagccggcggtcctcgacatggaggacctggacaaaaaggcgatacgccttgct
ggaacgctggaccccgacaccatctccctggcctctgtcactgccgtcaccacgaacgtc
tcaaataagaggtcaaaaccagatatcaagatggagccaagctctggacgaccagtggat
tatcagatcagcatcacagtgatcgaggcgcggcagctgatcggcctcaacatggaccct
gtggtgtgtgtggagatcggagacgacaagaagtacacgtctatgaaggagtccaccaac
tgcccgtactacaatgagtatttcgtctttgatttccacgtccctcctgatgtcatgttt
gacaagatcatcaagctttcggttattcactctaaaaatcttcttcggagtgggacctta
gtgggaaactttaagatggatgtcgggactgtttactctcagcctgaacaccagttttat
cacaagtgggccatcctgtctgaccctgatgacatcacagcggggtgtaaagggtatata
aagtgtgacatcgctgtagtcgggaagggcgataacatcaagacgccgcacaaggctaac
gagactgatgaagatgaaatcgaggggaacctcctgctcccagagggcatcccagcagaa
aggcagtgggcacggttttatgtaaagatctaccgtgcagagggccttcctaaaatgaac
accaccatcatggctaacgttaagaaggccttcataggagagaacagagacctggtggac
ccctacgttcaagtgcagtttgctgggcagaaagggaagacgtccgtccagaagagcagt
tatgaaccgatctggaacgagcaggtcatcttcaccgagctgttccctcctctctgcaaa
cgcatgaaggtccagatacgagactcagataaggtcaacgacgtcgccatcggaacccac
tttattgacctgcggaagatatcaaatgaaggtgacaaagggttcctgcccactttgggt
ccagcctgggccaacatgtacggctccacccgtcagtacactctgatggacgagcaccag
gacctgaacgagggtctcggagagggcgtgtccttcagagcccgactccttgtctccatc
gctgtggagatcctggacaccacatcacctgagatcataagctccaccgaggtgcaggtg
gagaccgtgtccaacatctcagagagcgccacaggtaaaatggacgagttcttcctcttt
ggctccttcctggaggccaccatgattgacaggaagatcggcgacaaggcgataagtttt
gaaatcacaatcggtaactatggcaaccagatagatggtgtaagcaagccttcatccgcc
aagaagaagaagaaggacggagataatgaggaagaggagagcgagctcatccagaactcc
agcgaggacgaggcggacgaggacgcagacctggtctctgtctcctccactcctctaatg
aagcctgtcatcacagacagaaattacttccatcttccctactttgaaaagaagccgtgt
gtctacatcaaaagctggtggcaggaccagagaagacgactttacaactccaacatgatg
gacaagatcgctgataagctggaagagggtttgaatgatgtccaggagatcataaagaca
gagaaggcttttccggagcgcagactcaggggggtgcttgaggagctcagcgtcggctgc
agtcgttttgtgactctggctaacaaggacgtgaaccaggccggcagaaccaaactggac
cgagagcggctcaagtcctgcatgagagagatggacagcatggcccagcaggccaagcag
atccggactcaggtgaagaagcacacagtcagagacaaactcaagctggtgcagaacttc
ctgcagaagctccgtttcctggcggatgagcctcagcacagcatcccagatgttttcgtc
tggatgatgaccaacaacaagcgcatcgcctacgcccgcattccttccaaagacattctg
tactccatagtggacgaggaaacgggaaaagactgcggaaaagtcaaagctgtcttcctt
aagctgcctggtaagaagggctttggtcctgccggctggacggtgcaggctaagctggag
ctgtatctgtggctcggcctcaacaagcagaggaaggacttcctcaacggcctgccgaat
ggtttcgaagagatcaaagcagttaaaacgggtcccggtcttcaatctgtccctcctgtc
agcctcgtctacaacatgaagcaggtgtttcagctgcgagcgcacatgtaccaggcccgc
agcctgtttgcagctgacagcagtggcctttcagatcccttcgcccgggtcttcttctcc
acacacagccaggttacagaggtcctgagcgagactctttgcccgacgtgggaccagctt
ctagtgtttgacgacgtggagctgttcggggaggccagcgagctgagagacgacccgcca
atcatcgtagtggaaatctatgaccaggacactgtgggcaaggcagagttcataggtcgg
acgtttgcgaagcccaccatcaagatgtgtgacgagtactacggccccccgaggttcccg
ccgcagctggagtactaccaggtgttcagagggaactgcaccgccggggaactgctggct
gcgtttgagctgctgcagattggtcaaggagggagggccgatcttcctccccttgagggg
ccgacggacactgagcatggccccattctacccgtgccgttgggaatccgacctgttctg
agtcgctaccgcatagaggttttgttctggggcctgagggacctgaagaggatcaacctg
gctcaggtggatcggccgcgtgtggacatagagtgtgcaggtagaggcgtgcagtctgtc
ctcatccagaactacaagaagaaccccaacttcagcactttggttaaatggtttgaggtg
gaccttccagagaatgagcttctccaccctcctctcaacatccgggtggtggactgccgg
gcgtttggtcgttacatcctggttggatcccacgctgtctccagcctgagacgattcatc
tacaccaccccagacaagacctccaacaactgggccacggcaggtgacatcatcgtcaac
atggactcggatccttcaatccgaaaaatggacacagtcgtcaagttggacgctacgtct
gacgctgttgtaaaagttgacatgactgaagacgacagtgataaagataaaaagaagaag
aagaagaaaaagaagggaggagtagaagaggaggaggagacagatgagcgaatgctcgac
tggtggtccaaatattttgcctcaatagagacactgaaggagaccctcagagctcaggag
gcggctcaggccgaggcagaggagagagaggacctggagatcgctgcagaggctgcagat
ttcaaacccgatgaccttcttctgaaaggctccaagacaaaagaaaagagcaaagagaag
aagaactctaaggacaagaagaagggtcaggctgcagacggtgctgaaaagaaacctgtc
aaagcaaaagtggatgagcttttggtgtacaacaaggagctggagaccgagtatggagac
tttgaagactggctgcacactttcaacctctacagagggaaggccggggacgatgatgaa
cacgctctggatgacgacaggattgttggcagattcaagggatccctgtgtatgtacaag
ctacctgtgtctgaggagatcacaagggaggcaggatttgatcccaatatgggcatgttc
cagagcattccacacaacgatccaatccacgtccttgtccgagtctttgtggtccgggct
acagatctccatcctgctgacatcaatgggaaggctgatccatacgtcgtcatcaagctg
ggcaagtcagaggtcaaagacaaagagaactacatctccaaacagctcaatcctgtgttt
gggaaatcgtttgacatcgaggccacgttcccgatggagtccatgctcacggtgtccgtg
tacgactgggatctggtcggaaccgatgatctgatcggagagacaaagattgacttggag
aatcgtttctacagcaaatacagagccacctgcggcatttcatccaactactcagtccat
ggatacaatgtttggcgggaccctttgaagcccagtcagatcctggcgaagctctgcaag
gacggcaagatcgatgggcctcactatgggccaggaggcaaagtcaaggtggcaaatcga
atcttcatgggacccacagagatcgaggacgaaaatggtctgaagaagcagactgaggag
catttggctctgacggtgctgaaccactgggaggagatcccgagggtgggctgcaagctc
gtccctgaacacgtggagaccagacccctgctgaacgttgacaaacccggcatcgaacag
ggccgtattgagatgtgggtggacatgtttcctatggacatgcctgctcctggacctgcg
attgacatatcaccacggaaaccaaagagatatgagctcagggtgattatttggaataca
gacgaagttatactggaggacgatgattacttcactggggaaaagtccagtgacatattt
gtcaggggatggctgaaagggcagcaggaggacaagcaggacacagacgttcactatcac
tccctgactggcgagggcaactttaactggcgcttcgtctatcccttcgattacctcatg
gccgaggagaagatcgtcatctctaagaaagagtccatgttctcctgggatgagactgag
tataagatccctcctcgcctcacgcttcaggtctgggacgctgaccacttctctgccgat
gatttcctgggtgcgattgagctggacctaaaccggttccctcgtggcgccaagacggcc
aagcagtgttccctcaacatgatccgaaatgagcaggagctgccgaccatctccatcttc
aaacaaaagagggtcaaaggctggtggccgtttgtggcccgtgatgagaacgatgagatg
gagctcacgggtaaggtagaggctgagcttcatctggtgaccgcagaggaggcggagaag
agtcctgtaggactgggacgaaatgagccggacccactggagaaaccaaatcgtccagac
accaccttcctgtggttcctgagcccgctgaaagccatccgctacctggtgtgcaaccgc
tacaagtggctgatcatcaagatcgtgctggcgatgctgctgctcatcatgctgggcctc
ttcctctacagcatgccgggatacctcgtcaagaagctgcttggggcctga
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integrated database retrieval system
