Semicossyphus pulcher (California sheephead): 138590893
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Entry
138590893 CDS
T10596
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04115
p53 signaling pathway
spul04145
Phagocytosis
spul04148
Efferocytosis
spul04350
TGF-beta signaling pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138590893
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138590893
04518 Integrin signaling
138590893
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138590893
04148 Efferocytosis
138590893
09143 Cell growth and death
04115 p53 signaling pathway
138590893
09144 Cellular community - eukaryotes
04510 Focal adhesion
138590893
09142 Cell motility
04820 Cytoskeleton in muscle cells
138590893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138590893
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spul00536
]
138590893
Membrane trafficking [BR:
spul04131
]
Endocytosis
Phagocytosis
Opsonins
138590893
Glycosaminoglycan binding proteins [BR:
spul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138590893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_ADAMTS
TSP1_CFP_C
EGF_CA
cEGF
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
138590893
NCBI-ProteinID:
XP_069517413
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MMLCGIFLLVMLWSCEGARLAESRDDNSVYDLFELARVNKRHHGVSLVKGADPYSPAYKV
LNADLIPPVPDSSLRDLIDSIQAERGFLLLINLKQFKKNRGSLLTIEKNDGSGPVFEIIS
NGRANTLDVFFSTGDQQQLLSIEDADLATGHWKNITLFVQDDRVQLFVGCEDINVSELDV
PIQKVLSQEVADIARLRIGKGAAKEKFMGVLQNVRFVFGTTLDAILRNKGCQSGTALTDV
MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCDDIAGMFKELKGLGVVVKQLSNELRK
VSEDSALLKNQMNIYSGICIHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLIPCA
NATVPDGECCPRCGTPSDYAEDGWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCEGTSV
QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGFITRIRLCNSPTPQMGGQDCQGEG
RQTEICQKSPCPINGGWGPWSPWDSCTVTCGGGVQTRKRLCSDPVPKYGGKDCVGDATMR
QVCNKQECPIDGCLSNPCFPGARCTSFPDGSFRCGKCPLGYTGNGITCKDIDECKEVPDA
CHSHNGVHRCENTEPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHNCH
KNANCIYLGVFSESMFRCECRPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNC
PNLPNSGQEDHDKDGLGDECDNDDDNDGIPDDRDNCPRVYNPAQYDTDRDDVGDTCDNCV
FEDNTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL
EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD
DNDGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIHDVCPENFAISETDFR
RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDR
DDDYAGFVFGYQSSSRFYTVMWKQVTQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN
ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKNGLIRVVMYEGKRIMADSGNI
YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctggtgatgctttggagttgtgaaggcgcaaggttg
gcagagagccgcgatgataacagtgtgtatgacttattcgagctggcccgggtaaacaag
agacatcacggagtgagtttggtcaaaggcgcagatccatacagccctgcatacaaagtc
ctgaacgcagacctgatccccccggtccccgacagctccctcagggacctgatcgactcc
atccaggctgaaaggggcttcctcctcctcatcaacctgaagcagttcaagaaaaacaga
ggcagccttctgaccatcgagaagaatgacggatccggacccgttttcgagattatttct
aacgggagggcaaacactcttgacgtgttcttctccaccggggaccagcagcagctcctg
tccatcgaggatgcagatttggccactggacactggaagaacatcacgctgttcgtgcag
gatgaccgagtgcaactgttcgtcggctgtgaggacatcaatgtgtcagagctggatgtg
ccaatccagaaagtgctgtctcaggaggtggcagacatcgcaaggctcaggattggaaag
ggagctgcaaaggagaaattcatgggagtgcttcaaaatgtgcgctttgtctttgggaca
actctcgatgccattctgagaaataaggggtgccagagtggaactgccttaactgatgtc
atgaccctggacaaccctgtcaatggctccagccctgccattaggactgattacactggc
cacaaagccaaagacctgcagtctgtctgcggcttctcttgtgatgacatcgccggcatg
ttcaaggagctcaagggactcggcgtggtcgttaaacagctgtcgaacgagctccgcaaa
gtgtcggaggatagcgctctgctgaaaaatcaaatgaacatctacagtgggatttgcatc
cacaacggcattgtgcacaaggacaaagatgagtggaccgtggatggctgcaccgagtgc
acctgccaaaactctgctactgtgtgccgcaaaatctcctgtcctctgatcccatgcgct
aatgccactgtgcctgatggagaatgctgccctcgctgtggaacaccaagcgactacgca
gaggatggttggtccccctggtctgaatggaccccttgttctgtgacttgtggtcggggc
atccagcagcgtggacgctcctgcgaccgcatcaacagcaactgtgagggcacctctgtc
cagacccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttgg
agccactggtctccatggtcttcatgctctgtgacctgtggtgaggggttcatcacccgg
atacgcctctgcaactctccaacgccccagatgggtggtcaggactgccagggagaagga
cgtcaaactgaaatctgtcaaaaatcaccttgtcctatcaatggaggttggggaccctgg
tcaccatgggacagctgcactgttacctgtggaggaggagtccagacccgcaaacgtctc
tgctcagaccccgtccccaaatatggaggaaaggattgcgttggtgatgccacaatgaga
caagtgtgcaacaaacaggagtgccctattgatggttgtctctccaacccatgcttcccc
ggcgcaagatgcaccagcttccctgatggctctttcaggtgtggcaagtgtccacttggt
tacaccggaaacggcatcacttgcaaagacattgatgagtgcaaagaggtccctgatgct
tgccactcacataacggagtccatcgttgtgagaacactgaacctggttacaactgtttg
ccctgccccgcacgtttctctggtccccagcccttcggaagaggagttgagcaggcaacg
gcgaaaaaacaggtttgcaaaccccgaaacccttgccaggatggtagccacaactgccat
aaaaatgcaaactgtatctacttgggcgtcttctccgagtccatgttccgctgtgagtgc
aggccagggtatgccgggaatggccgtatctgtggcgaggacagtgacctggacggatgg
ccaaacactgacctgctgtgtgtggagaacgccacctaccactgcaagaaggataactgc
cccaaccttcccaactctggtcaggaagatcatgacaaagatggcctgggtgatgaatgt
gacaatgatgatgacaatgatgggatccccgatgatagggataactgcccaagagtgtac
aaccctgcccaatatgacacagacagagatgatgttggcgacacctgtgacaactgtgtg
tttgaggataacactgaccaaactgacactgacaacaacggagagggagatgcctgtgct
gttgacattgatggcgatggtattctgaacgagaacgacaactgcccatacgtttacaat
gtggaccagagagatactgacagggatggtgtgggagaccattgtgacaactgccctctg
gagcacaaccctgatcagattgactctgactcagatcgcataggagacaaatgcgacaac
aaccaggacattgacgaggacggtcaccagaacaacttggacaactgcccctacatcccc
aacgccaaccaggcagaccacgacaaagacggcaagggtgatgcctgcgaccatgatgat
gacaatgacggcattcctgatgacaaagacaactgtagactggcctttaaccctgatcaa
gtggactctgatggtgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaat
gttctcgacatccatgatgtgtgtccggagaacttcgccatcagcgaaacagacttccgc
agattccaaatggttcccctggaccccaagggcacctctcagattgaccccaactgggtg
gtccggcatcagggcaaggagctggtgcagactgtcaactgcgatcctggcattgctgtt
ggttacgatgagttcagtgccgtggacttcagtggaacattcttcatcaacacggacaga
gacgacgactacgctggattcgtgtttggctaccaatccagctcacgcttctacacggtc
atgtggaaacaagtcacacagacctattggtcccacacacccacaagagctcaaggctac
tctggcctgtcaatcaaagtggtcaactccaccactgggcctggtgagcatctgaggaac
gccctgtggcacaccggagacacagcaggacaggtgcgcactctgtggcacgacccaaag
aacattggctggaaggacttcactgcctacagatggcatctgacccacaggcctaagaat
ggacttattagagttgtcatgtatgaaggaaagagaatcatggccgattctggaaacatc
tatgacaagacgtatgctggtggacgactaggcttgtacgtcttctctcaggagatggtt
tacttctcagatctcaaatatgaatgcagagatacataa
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integrated database retrieval system
