Semicossyphus pulcher (California sheephead): 138592086
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Entry
138592086 CDS
T10596
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04010
MAPK signaling pathway
spul04120
Ubiquitin mediated proteolysis
spul04140
Autophagy - animal
spul04144
Endocytosis
spul04517
IgSF CAM signaling
spul04620
Toll-like receptor signaling pathway
spul04621
NOD-like receptor signaling pathway
spul04622
RIG-I-like receptor signaling pathway
spul05132
Salmonella infection
spul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138592086 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138592086 (traf6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138592086 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138592086 (traf6)
04140 Autophagy - animal
138592086 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138592086 (traf6)
04621 NOD-like receptor signaling pathway
138592086 (traf6)
04622 RIG-I-like receptor signaling pathway
138592086 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138592086 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
138592086 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138592086 (traf6)
04121 Ubiquitin system [BR:
spul04121
]
138592086 (traf6)
Enzymes [BR:
spul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138592086 (traf6)
Membrane trafficking [BR:
spul04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138592086 (traf6)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138592086 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF6_Z2
U-box
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
CEP104_ZnF
zf-rbx1
BLI1
Prok-RING_4
DM
zf-TRAF_2
Tropomyosin
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
138592086
NCBI-ProteinID:
XP_069518811
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MACFDSNKGSLEEDSYDGAVGGELSSCGLAMMEKERESLLSPSESPGTFMSSNSASLQAA
VPIQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVDNA
MLSEDQLFPDNFAKREILSLTVRCPNMDCAEKMELRHLENHLARCPFAVEPCPQCQQSLR
KSLLEEHKSVECRRRILTCPDCVASFVYEESEMHEQQCPFASVRCQYCEMDLIRDQMESH
CDTDCPKAPTACNFSAFGCKERMQRHNLAQHMQAFTQMHMRYMADFLRGLTLNGTSPKSL
WLQAPSVSTEDQGAAASVAACSGPRGAASCITNSGPSQPSDEMQRIREMDGRLVKQDHQL
RELIILKETQAGQLAELKRKVSMLEETVKELEAHQCHGIFIWRLKGFSAHLRNQEAGHPV
VEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGDFDGMLTWPFQGTIRLA
ILDQGPESQHHTEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLHQLNQRAFVKDDTLLI
RCEVTPRFDNMLHREGPAVQPRGPEASV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcttcgacagtaataagggaagtttggaggaggacagctatgacggagctgtt
ggtggagagctttctagctgtgggttggccatgatggaaaaggaacgggaatcacttctc
agcccttcagagagccctggcaccttcatgagcagcaactccgccagccttcaggctgca
gtccccatccagggctatgacgtggagtttgacccaccactggagagtaaatatgagtgc
cctatctgcctcatggctttgaggaatgccattcaaacaccctgtggtcatcgtttctgc
aagaactgcattgagaagtccattcgggatacagggcagaggtgccctgtagataatgca
atgctgtcagaagaccagctgtttcctgataactttgccaaacgggagattctttcacta
actgtacgctgtccaaacatggactgtgctgagaaaatggagctcagacatttagagaat
catttggcacggtgtccttttgccgtagagccttgcccccagtgccagcagtcgttgaga
aagagcctcttagaggagcacaaatccgtggagtgccgaaggagaattttgacgtgtcca
gattgtgtggcgagctttgtttacgaggagagcgagatgcatgaacagcagtgtcccttt
gccagtgtaaggtgtcagtactgtgagatggatctcatcagagaccagatggaatctcat
tgtgatacagattgtccgaaagccccaactgcctgtaactttagtgcctttggatgtaag
gaaaggatgcagcgtcacaacctggctcagcacatgcaggcgttcacacagatgcacatg
cgttacatggcagactttctgcgtggtctaaccctgaatggcacctcacccaaatccctg
tggttgcaagcaccttctgtttccactgaggatcagggagctgcagcatctgtagcagcc
tgtagtgggcccagaggagctgctagctgcatcaccaacagtggccctagtcagcccagc
gatgagatgcagaggatcagggagatggacggacgactggtgaagcaggatcaccagctg
cgtgagctcatcatcttaaaagaaacgcaggctggtcagcttgcagagctcaagcgcaaa
gtgtcaatgctggaggagacggtgaaggagctggaggcccaccagtgtcatggcatcttt
atctggcgtctgaaaggtttctccgcccacctgcgtaaccaagaagctggccatccagtg
gtcgagcacagccccggtttctacaccggccgacctggctacaagctgtgcctgcgacta
catctgcagacccccaacgccccacgctgctccaactatatctccctctttgtccacacc
atgcaaggagattttgatgggatgctgacctggccattccagggcaccatccgcctcgcc
atcctagaccagggtcccgagagtcagcaccacacggaggtgatggagaccaaaccagac
ctgcaggccttccagaagcccaccatccagcgcaaccccaaaggattcggctatgtcact
tttctgcacctgcatcagctgaatcagagagcctttgttaaagatgacactctacttatc
cgctgtgaggtgacaccgcgttttgacaatatgcttcaccgtgagggaccagcagtgcaa
cctagaggaccagaggcctcagtgtga
DBGET
integrated database retrieval system
