Semicossyphus pulcher (California sheephead): 138595778
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Entry
138595778 CDS
T10596
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04530
Tight junction
spul04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138595778 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
138595778 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spul04990
]
138595778 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
spul04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
138595778 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
138595778
NCBI-ProteinID:
XP_069523294
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MGNVESQNGDSGFYGDVTGHLSRKHTSRSLRLSNKQQITRRSRHSSSVKQEHRNSEASTR
SSSTPSIPQSLAENGLEPFNAADEFGEFGINPHWTQRVAMTMRPESYQHDDDQLATPTPE
TSEADTVAQDGGEDSMGEGEGDVIGDERYLQRMTEGPREGGSFKKKRSKSADMWREDSLE
FSLSDLSQEHLTSTEEMIDGGEEEEEEQFTRPRASACKGSAERASSLDHLCSQQSPGLRG
QRSRFAKNRREAECDGNGEGEEGLMSPTEEDGGGYGAFTLPCRRSHCLSEGLAGLGITTA
PRPAFQGRRAQTTQDISGVLGEGSEYGDSGIDGVATEIDGDGELVSRRCKAMSASFSVYS
ATESSVFNGSDSGSSSAGGGDGRGGEGVRGGVYENFRKELDNQAWTHQGRDCTEEAGSAV
SDEQSSGTLSNAYPSDTLIGCAQGTVRKAGALAVKNFLVHKKNKKVEPATKRKWKHYWVS
LKGCTLFLYESDCRSGIDHNSIPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQ
TSGQTELENWITAIHSACAAALARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQL
STVTDGKKRKTILEQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTK
LAMGRLGIFSVSSFHALVSARTESSIRKRNQAVPRTFSKRRSRFSSLWGLDTTSKRKTTG
HPSINQVFVEGMEPVRKPLERMFEDSASERSKAREGSVKSVPQPNVDSDIWVPDYLTPSW
VCLPSNQPVLAIIQPGETSLEVLSAVCKTHNLDPSCHYLRLKVWIDNQMLFYVPKLEEDI
SDLLYKEIEICPKATKVIRFDKAESCTIGYGFSVAVIDEDGMQQLHITEVKAEGLASAKG
LKAEDEILLLNGKPASALQMEDMRAAFVNQALTLSVSTVPQLDSRLLCSIPPRRSDGEQD
PATDIFSQSQEDILDEVSGLTANTPDVSLDEGPRLTLQSPGGHQEDKPCMGIGQKSTEQV
TAFCRSLHDMNPLDCPMSSSSSSSSSSLTPSPVSAFPPAAGNAAQRQLSHADKLRKVINE
LVETEKTYVKDLSCLIECYLTPLQQESFLTQDELDVLFGNLAEMVEFQVEFLRTLEDGIR
LVPNIEHLERVEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKA
FLAVRNPRQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKV
ASHINEMQKLHEEYGAVFDQLINDQTADKKEVADLSMGDLLLHSTVMWINPPASLVKSKK
DPDLAAFVFKTAVVFVYKDSSKHRKKIGASHRASVSDDRDPFRFRHMIATDSLQVRNLAN
SEGTAVCEIVHTRSESEGRPERTFQLCCSSPDSKKDLLKAVHSILREKQRRQLLKTESLP
PNQQYVPFGGKRLCALKGARPGMNRAASAPSRTLARRKLVRNRFTIDTDLVFHGNNNNSS
DSDPSSHSPLSQHALLQPHKPQGEDTDRWVEEQFDLARYEDQGEGIDMAQVKETDILSDD
DEYCKSVRAASAEPPNLEGKMDGLNLNGRVETGGDRTKRDGDFVDSYTSCGVSLSRCATP
TVKLAPRPKQCAVEGATNKDHDVIWVRREDFANGCNSDVF
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggagagtcagaatggggacagcggtttctacggtgacgtgaccggacat
ctctcgcgtaaacacacatcccggtcactccgcctctccaacaagcagcaaatcacccga
cgctcgcgacactcttcttcagtgaaacaggaacacagaaactctgaagcctcaacccgc
tcctccagcaccccgagtatcccacaatccttagcagagaacggactggagccttttaac
gcagcagatgagtttggcgagttcggcatcaaccctcactggactcagcgcgtggcgatg
acaatgaggcctgagtcctatcaacacgacgacgaccaattggccacgcccacacctgaa
acatcagaggcggacactgttgctcaggatggaggagaggactccatgggggagggggag
ggggacgttattggagatgaaaggtaccttcagcggatgactgaaggaccgcgagaggga
gggagctttaaaaagaagaggtcaaagtctgcggacatgtggagggaagacagcctggag
ttctctctgtctgacctgagccaggagcatctgaccagcaccgaggagatgatcgatgga
ggagaggaagaggaggaggagcagttcacacgccctagagccagtgcatgtaaaggctcc
gctgaaagggcatcgtctctcgaccatctgtgcagccagcagagtcctggcctcaggggg
cagaggagccgcttcgctaaaaaccggcgagaggcagagtgcgatggaaacggagaaggg
gaggaggggttgatgtctcccaccgaggaggatggcggcgggtacggagcattcacgctc
ccctgccgacgctcccactgcctgtctgagggcctggcagggctgggcatcacgactgcg
ccgcgtcctgctttccaaggacgccgcgcacaaactactcaggatatttcgggtgttctg
ggcgagggaagcgagtacggcgacagcggcatcgatggtgtcgccacggagatagacggg
gacggagagttggtgtcccggcgctgcaaagccatgtccgcttctttctccgtgtactcc
gccaccgagagcagcgtgttcaacgggagcgacagcgggagcagcagcgcagggggagga
gacggacggggcggcgagggagtcaggggaggagtgtatgagaatttccggaaggagctg
gacaatcaagcctggacgcatcagggtcgggactgcacagaggaggctggctccgccgtg
agtgacgagcagagcagcggcacgctcagtaacgcttatccatcagacactctgattggc
tgtgcacagggcacggtcaggaaagcaggagctctggctgtgaagaacttcttggttcat
aagaaaaacaagaaggtggaacctgcaacgaagcgcaagtggaaacattactgggtctct
cttaaaggctgcaccctcttcctgtacgagtccgactgtcgctccgggatcgaccataac
agcattcctaaacacgcactgtgggtggagaatagcatcgtccaggctgtacctgaacac
cccaagaaagactttgtcttctgcctcagcaactcagtgggagacgcctttctcttccag
acgtcaggccagaccgaactggagaactggatcacggcgatccactcggcgtgtgccgcc
gctctggctcggcagcatcacagggaggatacggtgcgactgctgcggacagagatccgc
aagctggagcagaagatcgacatggacgagaagatgaagaagatgggagacatgcagctg
tccaccgtcactgacggcaagaagaggaagaccatactggagcagatcttcctgtgggag
cagaacttggagcggtttcacatggatctcttccgctgtcgctgctacctggccagtctg
cagggcggcgaaccccccaaccccaaacgcctgctgggcttcgcttcgcgtcccaccaaa
ctggccatgggacgactgggcatcttctccgtgtcttccttccatgcgctggtgtcagcc
cgcacagaaagcagcatcaggaagaggaaccaggccgtgcctcgaaccttcagtaaacgt
cggagccgcttctcctccctctggggtctggacaccacctcaaagaggaagaccaccgga
cacccctcaatcaaccaggtgtttgttgaagggatggagccggtgagaaagccattggag
cgcatgtttgaagactcggccagtgagagatcgaaagcgagagagggctcggtgaaaagt
gttcctcagccaaacgtagacagcgacatctgggttcctgattacctgactccctcctgg
gtgtgtctgcccagcaatcagcccgtcctggccatcatacagcccggggagacgtcgctg
gaagtcctgagcgctgtctgcaagacgcacaacttagacccctcctgccactacctgcgt
ttgaaggtgtggatcgacaaccagatgctcttttatgttcccaaacttgaagaggacatc
tctgatctgctctacaaagagatcgagatttgccccaaagctacaaaggtgatccgcttt
gacaaagccgagtcctgcaccatcggatacggtttctctgtggcagtcatagacgaggac
gggatgcagcagctccatatcactgaagtgaaagcagagggactggcttcagccaaaggt
ttgaaagcagaggatgagatcctgttgctgaacggtaaacctgcgtctgccctccaaatg
gaagatatgagggctgcgttcgtaaaccaagcgctgaccttgagcgtcagcaccgtgccc
cagctggactctcgactattgtgctctattccaccccggcgctccgatggggagcaggac
ccggccacggacatcttctcccagagccaagaggacatcctggatgaggtgtcgggttta
acagcgaataccccagacgtgagtttagatgaaggacctcggctgaccctgcagagcccc
ggaggtcatcaggaagacaaaccctgcatggggatcggacagaagagcacggagcaggtc
accgctttctgccgcagtctccatgacatgaatcccctggactgccccatgtcgtcatcc
tcatcgtcctcttcttcgtccctcaccccgagccccgtgtcagcttttccgcccgcagcg
ggaaacgccgcccagagacagctctcccacgctgacaaactccgcaaagtcatcaatgaa
cttgtggagacggagaaaacttatgtcaaggacctgagctgcctgatagagtgctacctg
acacctctgcagcaagagagcttccttacgcaggatgagctggacgttttgttcggtaac
ctcgcagagatggtggagttccaggtggagtttctccggacgctggaagatggaatcaga
ctggtgccgaatattgagcatctggaaagagtggagcaatttaagaaagtgctcttctcc
ctgggtggttcgttcttgtattatgccgatcgcttcaagatctacagcgccttctgcgcc
agccacaccaaagtccccaaggtgctggctaaagcaaagacagacccagatttcaaagct
ttcctggccgtgagaaaccccagacagcaacattcatccactctggagtcgtacctgatc
aaacccatccagagggtcctgaagtacccgctgctgctgagggagctctactcgctcaca
gacccagacagtgaggagcactaccacctggatgttgcaatgaaggccatgaacaaagtt
gcgagtcacatcaatgagatgcagaagcttcatgaggagtacggggctgtgttcgaccag
ctcatcaacgatcagactgcagataaaaaggaggtggcggacctctcaatgggagatctt
ttgctgcattctactgtgatgtggattaaccctccagcctctttagtcaagagcaaaaag
gaccctgatttggctgcttttgtgttcaaaacagcggtcgtgttcgtgtacaaagacagc
tccaagcacaggaaaaaaattggcgcgtctcaccgagcgtctgtgagtgatgacagagat
cctttccgtttccgtcacatgattgcaacagactctcttcaagtccgcaaccttgcaaac
tctgagggtacggctgtgtgcgagatagttcatacgagatcggaatctgaaggaagacca
gagagaaccttccagctgtgctgcagttctccagacagtaagaaggaccttctgaaagca
gtgcactccatcctgagggaaaagcagcggcggcagcttcttaagacagagtctctgccc
cccaaccagcagtacgtccccttcgggggcaaacgtctgtgtgctcttaaaggggcgcgg
cccggcatgaacagagcagcatcagctccatcacgaacgctggcccgcaggaagctagtg
cggaaccgcttcacaatagacaccgacctggttttccacggcaacaacaacaacagcagc
gattcagacccctcctcgcactcaccgctgtcccagcatgctcttcttcaaccccacaaa
cctcaaggagaggacacggaccgctgggtggaggagcagttcgaccttgctcgctatgaa
gaccagggggagggcatcgacatggcgcaggtgaaggagacggacattttgagcgacgac
gacgagtactgcaagtcggtccgagccgcgtcggcggaacctcccaacctggaggggaag
atggacggactcaacttgaacgggcgagtagagaccggaggtgatcgaacaaagcgcgat
ggtgactttgtagactcctacacctcctgcggcgtctctctttcccgctgtgcaaccccg
actgtcaagctcgcccctcgcccgaagcagtgtgctgtggagggggccacaaacaaggac
catgacgtcatatgggtgcggcgggaggactttgcgaacgggtgcaacagtgacgtcttc
tga
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integrated database retrieval system
