Semicossyphus pulcher (California sheephead): 138596787
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Entry
138596787 CDS
T10596
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spul04040
]
138596787 (trpc6a)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138596787 (trpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
DUF6744
Motif
Other DBs
NCBI-GeneID:
138596787
NCBI-ProteinID:
XP_069524248
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MNHRPPAVHHNSRPVGYSDSPRARSRDNLLLYDDFGEESCCPGRCLGHSSSERQLLAPLS
AVKRRQALRGPAYMFSAPSINLSEVEQRFLEAAEYGNIPEVRRMLLHVPSLNVNAVDYMG
QNALQLAVANEHLEVTELLLGRGDLARVGDALLLAISKGYVRITEALLCHPAFRDAHRLT
ASPAQADMLDDFYAYDEDGTRFSQDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFCG
CDSCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLADIEKEF
KHDYCCLSSQCKDYVVGLLDLCRSTEEVEAILSGETDSDDCFDIPGRPSLTRLKLAIKYE
LKKFVAHPNCQQQLLSIWYENLPGLRQQTTAIKLLVVLAVAIGLPGLSVAYWIAPCSRAG
KVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHHDHPGGPHVNSDPLLLY
RMTTTPFTWMEILIISWVIGMIWAEVKEIWSQGPGEYLLEPWNFLDFGMLAIFLASFSCR
FSTLRHAHLAQTEVHTRYTTLINVTLPPEIHYFTLARIYWLPSDPQLVSEGLYAVAVVLS
FSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAKQND
AFTTLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAM
INSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSILGLAKALKSLLLH
FVEGHTEEKAETPLNQLGESKNSGFASSTSPSRYQKIMKRLIKRYIIKAQADKESDEITE
GELKEIKQDISSLRYELLEEKSQNMETLDGLLKRLGEIGTPTE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccaccagcggttcatcacaacagccgacctgtgggttacagcgacagc
cccagagctcggagccgagacaacctgctgctgtacgatgactttggagaggagagctgc
tgtcctggacgatgcctcggccacagcagctcggagaggcagctcttggctcctctcagt
gctgttaagcgacgccaggctctccgtggtcctgcctacatgttctctgctccttcgatc
aacctgtcggaggttgagcaacgtttcctggaagctgctgaatacggcaacataccagag
gtgcggcgcatgctgctccacgtgccaagcttgaacgtcaacgctgtggactacatgggc
caaaatgcgttgcagctggctgtggccaacgaacatctggaggtgactgagctgctgctg
gggaggggagatctggccagagtgggtgacgccctcctgttggcaatcagtaaaggttat
gtccgtatcacagaggccctgttgtgtcaccccgcgttcagagatgcccatcgtctgaca
gcgagccctgctcaagcagacatgttggatgatttctacgcttatgatgaggacgggacg
aggttctctcaagatgttactccagtgatcctcgctgctcactgccaggagtatgagata
gttcacaccctgctgagtaaaggcgctcgaatcgatcctcctcatgattacttctgcggc
tgcgactcctgtaactaccagcagcagttcgactccttcagtcactcccgatccaggatc
aacgcctacagaggactcgccagccctgcgtacctctccctgtccaacgaggaccctgtt
ctggctgctctggagctcagcaacgaactggccatgttggctgatatagagaaagagttc
aagcacgactactgctgcctgtcaagccagtgtaaagactacgtggtgggtcttctggat
ctgtgtcgcagcaccgaggaggtggaggccatactgagcggcgagactgactctgacgac
tgctttgacataccaggtcgcccctccctcacacggctcaaactagccatcaagtacgag
ctgaaaaagtttgtggcccatccaaactgccagcagcagctgctgagtatctggtacgag
aacctgcccggcctgagacaacaaaccacagctatcaagctgctggtggtgctggcggtg
gcgatcggactgcctggtctatctgtggcttactggattgctccgtgcagcagagcggga
aaagtgatgcggagccccttcatgaagtttgtggcccatgcctcgtcattcactattttt
ctgggtcttttgatcctgaacgctgccgatcgtttcgcaggaaccaccttgttgccaaac
atgacccaccatgaccacccaggaggaccccacgtcaactccgaccccctgctgctgtac
cgaatgaccacgaccccctttacatggatggagatcctcattatttcatgggtcattggt
atgatctgggcggaggtgaaggagatctggagtcaggggccgggcgagtacctgctcgaa
ccgtggaacttcctggactttgggatgctggccatcttcctcgcctccttcagctgccgc
ttctccaccctgagacacgcccacctagcccagaccgaagtgcacacgcgctacacaaca
ctgattaacgtcacgctgcccccggagatacactacttcacactggctcgtatttactgg
ctgccgtcagatcctcagctggtgtcggagggtctgtacgccgtcgctgtggtgctgagc
ttctctcggatcgcttacatcctcccggccaacgagagcttcggcccgctgcagatctct
ttagggaggaccgtcaaggacatcttcaagttcatggtcatcttcatcctggtgtttctg
gcgtttatgatcggcatgtttaacctgtactcgtattaccttggagccaagcagaatgac
gccttcaccaccctggaggagagcttcaagacgttgttctgggctatatttggactctct
gaggtcaggtctgttgtgatcaataacggacacaaattcattgagaacatcggttacgtg
ctttatggggtttacaacgtcaccatggtgatagtgctgctcaacatgctcatcgccatg
atcaacagctccttccaggagattgaggatgatgctgatgttgagtggaagtttgctcgg
gctaaactctggttctcttactttgaggagggaaggacgctccctgtgccctttaacctg
gtgccaagtccaaaatctatactgggactggccaaggccctcaagtctctgctgctgcac
tttgtggaaggacacacagaggagaaagctgagacgccgctcaaccagcttggtgaaagc
aaaaattcaggatttgcctcctctaccagcccatccagatatcagaagatcatgaagcga
ttgataaagcgttatatcatcaaagcccaagcagacaaagagagtgacgagatcactgaa
ggtgagctgaaggagatcaagcaggacatctccagtttgcgatacgagctgctggaggag
aaatcacagaacatggagacgctggacggactgctgaagaggctcggagagatcggtaca
cctacagagtaa
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