Entry |
|
Symbol |
traf2b
|
Name |
(RefSeq) TNF receptor-associated factor 2
|
KO |
|
Organism |
spul Semicossyphus pulcher (California sheephead)
|
Pathway |
spul04141 | Protein processing in endoplasmic reticulum |
spul04621 | NOD-like receptor signaling pathway |
spul04622 | RIG-I-like receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:spul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138602336 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138602336 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138602336 (traf2b)
09143 Cell growth and death
04210 Apoptosis
138602336 (traf2b)
04217 Necroptosis
138602336 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138602336 (traf2b)
04622 RIG-I-like receptor signaling pathway
138602336 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138602336 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138602336 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
138602336 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:spul03019]
138602336 (traf2b)
04121 Ubiquitin system [BR:spul04121]
138602336 (traf2b)
Enzymes [BR:spul01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138602336 (traf2b)
Messenger RNA biogenesis [BR:spul03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138602336 (traf2b)
Ubiquitin system [BR:spul04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138602336 (traf2b)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
519 aa
MARISMDCSNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFRQLTSS
GPKPCEACRQEEIYEEPVSILNSSEAFPDNAAGREIASLPARCLNQGCTWTGSIKEYEAQ
HEGRCEFERIPCEACQALILRTEKDRHNERECEARTLNCKYCKMTFHFKDIKAHDEICVK
FPLQCKDCGKKKIPREKFNDHSKSCAKSKSACPFNEVGCKFLIENGKLSDHENSSTMEHL
RLLLPMVLTMARTRADAGAGEWQEDSGLGLYRSPEEGVTMGVGAAASVQPVGLDKKVNAL
ENIVCVLNREVERSLVTLEAFSHQHRLDQEKIENLSNRVNQLERTVQMRDLQLSEREQMV
RDLQLCTYDGIFVWKITDFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTG
RGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPISE
MNIASGCPLFCPLAKLAGKSAYLRDDTIFIKAIVDLTGL |
NT seq |
1560 nt +upstreamnt +downstreamnt
atggctcgaatctcgatggactgctccaactctttaccagggatccccctcagtgtgctg
tcggtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaggcagctcaccagttct
gggccaaaaccatgcgaggcttgccgccaagaggaaatatacgaggagcctgtgtccatt
cttaacagtagtgaggcgtttccagacaatgccgcaggtagagagatagccagtctgcct
gccaggtgtttgaaccagggctgcacctggaccggctccataaaagagtatgaggcgcag
catgaaggtcgctgtgaatttgagcggataccgtgcgaggcctgccaagccttgatcctt
cgtacggagaaggacagacacaatgagagggagtgtgaggccaggacgctcaactgcaaa
tactgcaaaatgaccttccactttaaagacatcaaggcccatgatgagatctgtgtgaag
tttccccttcaatgcaaagactgtggaaagaagaagatcccacgagagaagttcaatgac
cacagcaagtcctgcgccaagtcaaagagtgcctgtccattcaatgaagtgggctgtaaa
tttttgatagagaacgggaagctcagcgaccatgagaacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgaccatggctcggacgcgggccgacgccggcgccggg
gagtggcaggaggactctggtctgggcctgtaccggtctcctgaggagggagtcactatg
ggcgtcggagccgcagcctccgtgcagcctgtgggcttggacaaaaaggtcaacgcttta
gaaaacatagtgtgcgtcctgaaccgggaagtggagcgcagtttggtgacattagaggcc
ttctctcatcaacatcgtttagatcaagaaaaaatcgaaaacctctcgaatagagtgaat
cagttagagcggacggtgcagatgagagacctgcagctgtctgagagggagcagatggtg
cgagatctccagctctgcacctacgacgggatatttgtgtggaaaatcacagacttctcg
cgccgcaggcaggacgctgtggccggacgggcgcctgcgatgttctctccagcgttttac
tccagcaaatacggatacaaaatgtgcctgagactgtatctgaacggggacgggacgggc
cgagggactcacctctctctgttctttgtggtcatgaggggaaagtgcgacgcgctgctc
aaatggccgttcagccagaaggtgactctcatgctcttggaccagaacaacagggagcac
ataatcgacgctttccgccccgacgtcacctccacctccttccagcggccgatcagcgag
atgaacatcgccagcggctgcccgctcttctgcccgctggccaagctagcgggaaagagc
gcctacctgagggatgatacaatattcatcaaagccatcgtggacctcaccgggttatag |