KEGG   Semicossyphus pulcher (California sheephead): 138602336
Entry
138602336         CDS       T10596                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04010  MAPK signaling pathway
spul04137  Mitophagy - animal
spul04141  Protein processing in endoplasmic reticulum
spul04210  Apoptosis
spul04217  Necroptosis
spul04621  NOD-like receptor signaling pathway
spul04622  RIG-I-like receptor signaling pathway
spul04920  Adipocytokine signaling pathway
spul05132  Salmonella infection
spul05168  Herpes simplex virus 1 infection
Brite
Enzymes [BR:spul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138602336 (traf2b)
Messenger RNA biogenesis [BR:spul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     138602336 (traf2b)
Ubiquitin system [BR:spul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    138602336 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX zf-RING_6 TRAFD1-XIAF1_ZnF Sina_ZnF zf-RING_10 ATG16 Pus10_C zf-C3HC4_5
Other DBs
NCBI-GeneID: 138602336
NCBI-ProteinID: XP_069529907
LinkDB
Position
Unknown
AA seq 519 aa
MARISMDCSNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFRQLTSS
GPKPCEACRQEEIYEEPVSILNSSEAFPDNAAGREIASLPARCLNQGCTWTGSIKEYEAQ
HEGRCEFERIPCEACQALILRTEKDRHNERECEARTLNCKYCKMTFHFKDIKAHDEICVK
FPLQCKDCGKKKIPREKFNDHSKSCAKSKSACPFNEVGCKFLIENGKLSDHENSSTMEHL
RLLLPMVLTMARTRADAGAGEWQEDSGLGLYRSPEEGVTMGVGAAASVQPVGLDKKVNAL
ENIVCVLNREVERSLVTLEAFSHQHRLDQEKIENLSNRVNQLERTVQMRDLQLSEREQMV
RDLQLCTYDGIFVWKITDFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTG
RGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPISE
MNIASGCPLFCPLAKLAGKSAYLRDDTIFIKAIVDLTGL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggctcgaatctcgatggactgctccaactctttaccagggatccccctcagtgtgctg
tcggtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaggcagctcaccagttct
gggccaaaaccatgcgaggcttgccgccaagaggaaatatacgaggagcctgtgtccatt
cttaacagtagtgaggcgtttccagacaatgccgcaggtagagagatagccagtctgcct
gccaggtgtttgaaccagggctgcacctggaccggctccataaaagagtatgaggcgcag
catgaaggtcgctgtgaatttgagcggataccgtgcgaggcctgccaagccttgatcctt
cgtacggagaaggacagacacaatgagagggagtgtgaggccaggacgctcaactgcaaa
tactgcaaaatgaccttccactttaaagacatcaaggcccatgatgagatctgtgtgaag
tttccccttcaatgcaaagactgtggaaagaagaagatcccacgagagaagttcaatgac
cacagcaagtcctgcgccaagtcaaagagtgcctgtccattcaatgaagtgggctgtaaa
tttttgatagagaacgggaagctcagcgaccatgagaacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgaccatggctcggacgcgggccgacgccggcgccggg
gagtggcaggaggactctggtctgggcctgtaccggtctcctgaggagggagtcactatg
ggcgtcggagccgcagcctccgtgcagcctgtgggcttggacaaaaaggtcaacgcttta
gaaaacatagtgtgcgtcctgaaccgggaagtggagcgcagtttggtgacattagaggcc
ttctctcatcaacatcgtttagatcaagaaaaaatcgaaaacctctcgaatagagtgaat
cagttagagcggacggtgcagatgagagacctgcagctgtctgagagggagcagatggtg
cgagatctccagctctgcacctacgacgggatatttgtgtggaaaatcacagacttctcg
cgccgcaggcaggacgctgtggccggacgggcgcctgcgatgttctctccagcgttttac
tccagcaaatacggatacaaaatgtgcctgagactgtatctgaacggggacgggacgggc
cgagggactcacctctctctgttctttgtggtcatgaggggaaagtgcgacgcgctgctc
aaatggccgttcagccagaaggtgactctcatgctcttggaccagaacaacagggagcac
ataatcgacgctttccgccccgacgtcacctccacctccttccagcggccgatcagcgag
atgaacatcgccagcggctgcccgctcttctgcccgctggccaagctagcgggaaagagc
gcctacctgagggatgatacaatattcatcaaagccatcgtggacctcaccgggttatag

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