KEGG   Semicossyphus pulcher (California sheephead): 138602336
Entry
138602336         CDS       T10596                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04010  MAPK signaling pathway
spul04137  Mitophagy - animal
spul04141  Protein processing in endoplasmic reticulum
spul04210  Apoptosis
spul04217  Necroptosis
spul04621  NOD-like receptor signaling pathway
spul04622  RIG-I-like receptor signaling pathway
spul04920  Adipocytokine signaling pathway
spul05132  Salmonella infection
spul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    138602336 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    138602336 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    138602336 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    138602336 (traf2b)
   04217 Necroptosis
    138602336 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    138602336 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    138602336 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    138602336 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138602336 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138602336 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spul03019]
    138602336 (traf2b)
   04121 Ubiquitin system [BR:spul04121]
    138602336 (traf2b)
Enzymes [BR:spul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138602336 (traf2b)
Messenger RNA biogenesis [BR:spul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     138602336 (traf2b)
Ubiquitin system [BR:spul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    138602336 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX zf-RING_6 TRAFD1-XIAF1_ZnF Sina_ZnF zf-RING_10 ATG16 Pus10_C zf-C3HC4_5
Other DBs
NCBI-GeneID: 138602336
NCBI-ProteinID: XP_069529907
LinkDB
Position
Unknown
AA seq 519 aa
MARISMDCSNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFRQLTSS
GPKPCEACRQEEIYEEPVSILNSSEAFPDNAAGREIASLPARCLNQGCTWTGSIKEYEAQ
HEGRCEFERIPCEACQALILRTEKDRHNERECEARTLNCKYCKMTFHFKDIKAHDEICVK
FPLQCKDCGKKKIPREKFNDHSKSCAKSKSACPFNEVGCKFLIENGKLSDHENSSTMEHL
RLLLPMVLTMARTRADAGAGEWQEDSGLGLYRSPEEGVTMGVGAAASVQPVGLDKKVNAL
ENIVCVLNREVERSLVTLEAFSHQHRLDQEKIENLSNRVNQLERTVQMRDLQLSEREQMV
RDLQLCTYDGIFVWKITDFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTG
RGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPISE
MNIASGCPLFCPLAKLAGKSAYLRDDTIFIKAIVDLTGL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggctcgaatctcgatggactgctccaactctttaccagggatccccctcagtgtgctg
tcggtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaggcagctcaccagttct
gggccaaaaccatgcgaggcttgccgccaagaggaaatatacgaggagcctgtgtccatt
cttaacagtagtgaggcgtttccagacaatgccgcaggtagagagatagccagtctgcct
gccaggtgtttgaaccagggctgcacctggaccggctccataaaagagtatgaggcgcag
catgaaggtcgctgtgaatttgagcggataccgtgcgaggcctgccaagccttgatcctt
cgtacggagaaggacagacacaatgagagggagtgtgaggccaggacgctcaactgcaaa
tactgcaaaatgaccttccactttaaagacatcaaggcccatgatgagatctgtgtgaag
tttccccttcaatgcaaagactgtggaaagaagaagatcccacgagagaagttcaatgac
cacagcaagtcctgcgccaagtcaaagagtgcctgtccattcaatgaagtgggctgtaaa
tttttgatagagaacgggaagctcagcgaccatgagaacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgaccatggctcggacgcgggccgacgccggcgccggg
gagtggcaggaggactctggtctgggcctgtaccggtctcctgaggagggagtcactatg
ggcgtcggagccgcagcctccgtgcagcctgtgggcttggacaaaaaggtcaacgcttta
gaaaacatagtgtgcgtcctgaaccgggaagtggagcgcagtttggtgacattagaggcc
ttctctcatcaacatcgtttagatcaagaaaaaatcgaaaacctctcgaatagagtgaat
cagttagagcggacggtgcagatgagagacctgcagctgtctgagagggagcagatggtg
cgagatctccagctctgcacctacgacgggatatttgtgtggaaaatcacagacttctcg
cgccgcaggcaggacgctgtggccggacgggcgcctgcgatgttctctccagcgttttac
tccagcaaatacggatacaaaatgtgcctgagactgtatctgaacggggacgggacgggc
cgagggactcacctctctctgttctttgtggtcatgaggggaaagtgcgacgcgctgctc
aaatggccgttcagccagaaggtgactctcatgctcttggaccagaacaacagggagcac
ataatcgacgctttccgccccgacgtcacctccacctccttccagcggccgatcagcgag
atgaacatcgccagcggctgcccgctcttctgcccgctggccaagctagcgggaaagagc
gcctacctgagggatgatacaatattcatcaaagccatcgtggacctcaccgggttatag

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