Semicossyphus pulcher (California sheephead): 138604086
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Entry
138604086 CDS
T10596
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spul04040
]
138604086 (scn4ab)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138604086 (scn4ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
NOA36
IQ
Motif
Other DBs
NCBI-GeneID:
138604086
NCBI-ProteinID:
XP_069532026
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MAPLLPPVGSEVFRRFTPASLEEIQRRHEVEEKEQQRRKEKNIEIAEENLPKPASDLEAG
KPVPFIYGEPPPELLNTPLEELDPFYQSQMTFIVLGKGNVIYRFNAEPACYCLSPFNPVR
TTAIKILIHSLFSMFIMVTILTNCAFMTMSDPPPWSKTVEYVFTIIYTFEATTKVLSRGF
CMGGFTFLKDPWNWLDFMVISMAYLTEVVDLGNVSVLRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPMLLNQTSDTDNDTYYH
GNDTYSNNTYGNNTHANDTDFAFYEHINNPDNYYYLPGQLDALLCGNSSDAGVCPEGYMC
LKAGRNPNYGYTSYDSFWWAYLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGS
FYLINLILAVVAMAYAEQNEATIAEIKQKEEEYAQILETLKKREEEQAACRAALSERRDL
ETSNSSTEITSHEEEHNAMDDFEDDQRPCPPCWYAFANIFLKWNCCGCWLWLKKWLYIIV
MDPFVDLGITICIVLNTVFMAMEHYPMTEEFENLLSVGNLVFTGIFTAEMVLKLLAMDPY
YYFQVGWNIFDSIIVTMSLVELGLADVQGLSVLRSFRLMRVFKLAKSWPTLSMLMKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISLDCELPRWHMYDFFHAFLIIF
RVLCGEWIETMWDCMEVSGQVMCLTIFMMVLVIGNLVVLNLFLALLLSSFSGDNLAAPDE
EGENNLQIAMNRIDRAVAWIKTWILEHIRALIGKKEHDNPVQNVVNSEEESSTSKEVLAL
TFVTPDQTMSDTKAQDCNHDILTSNYHNIASLRVPIAEAESDFETPDNDDDDEDEDDDDD
EEDEEEEEGEEQKHSQCDNSSVCSTVQKLPEVQEVAEDEDQDANTPEDCCTDKCFRRCPC
LDIDTSQGRGKMWSNLRRTCFSIVEHNYFETFIIFMILLSSGALAFEDINLEQRRAIKIV
LEYADQVFTYVFVVEMILKWVAYGYKTYFTNAWCWLDFLIVDVSLVSLTANILGYSDLGA
IKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAG
KFYYCYNETAEEMFSPDDVHNKTECLALIAENFTEVRWRNVKVNFDNVGMGYLSLLQVAT
FKGWMDIMYAAVDSTNEGSQPKYEDNLYMYIYFVGFIIFGSFFTLNLFIGVIIDNFNQQK
AKMGGTDLFMTEEQKKYYNAMKKLGSKKPQKPVPRPQNKFQGLVFDLVTTQFFDIFIMVL
ICLNMVTMMVETDEQSAEKENLLYWINLAFIVIFTSECSLKVIALRQHYFAVGWNIFDFV
VVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFNFETFGNSMICLFMITTSAGWDGLL
NPIMNMPPDCDPDVENPGSLVRGNCGSPAIGIVFFTTYIIMSFLVVVNMYIAIILENFNV
ATEESADPLCEDDFEMFYETWEKFDPSASQFIQYSKLSDFCDTLKDPLRIPKPNTIKLIQ
MDLPLVPGDKIHCLDILLALTAQVLGDSGEMDALKASMEEKFMANNPSKVSYEPISSTLR
RKQEEVAATVIQRAYRKHLLQRTVKLASYKYREKTEGRRDELQPPETEGLLFKRISQFYG
DKEETEEPGSGGEDPPPRVMLQSEFLLHAAPPLSAPDFLRDEDLKESIV
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcacctctgctgccccctgttggttcagaggtcttcagacgcttcacaccagcctcg
ttggaggaaatccaacgacgacatgaggtggaggagaaggagcagcagaggaggaaggag
aagaacattgagatagcggaggaaaatcttcctaaacctgccagcgaccttgaggctggg
aagcccgtcccattcatctatggagaaccgccccctgagcttctcaacactccattggag
gagctggatcccttctaccaatcacagatgaccttcatcgtgcttggtaaaggaaacgtt
atctacaggttcaatgcagagccagcctgttactgcctgagtccgttcaacccggtgagg
accaccgccatcaagatcctcattcactctttattcagtatgttcatcatggtgacaatt
ctgaccaactgtgcgttcatgacgatgagcgatcctccaccctggagcaagactgttgaa
tacgtgttcacaattatttacacgtttgaagcaacaaccaaagttctgtcacgaggattc
tgtatgggagggttcaccttcctcaaagacccctggaactggctggacttcatggtcatc
agcatggcttacctcacagaggttgtagatttaggaaacgtttccgtgttgaggacgttc
agagttcttcgtgctctgaagacaatcacagtcatccccggtctgaagacgattgtcgga
gctctaattcaatcagtgaagaagttggccgatgtcatgatcctgacggtgttctgcctc
agcgtcttcgctctgattggtctgcagctcttcatgggaaacctgcggcagaaatgtgtc
ctgataccacccatgttgcttaaccaaacgtctgacactgacaacgacacgtattaccat
ggcaacgatacctatagcaacaacacctacggcaacaatacccatgccaacgatacagac
tttgctttctatgagcacatcaacaacccagataactactactaccttcctggtcaactt
gacgctctgctgtgtgggaatagctctgatgccggggtctgtccggagggttacatgtgt
ctgaaggcaggcagaaatccaaactatggctacaccagctacgactcgttctggtgggcg
tacctgtcgctcttcagactgatgactcaggacttctgggaaaacctgttccagctgaca
ctgcgggcagcaggtaaaacctacatgatcttcttcgtggtcgtcatcttccttgggtcg
ttctacctcattaacctcatcctggcggtggttgccatggcctacgccgagcagaacgag
gccaccattgcggagattaaacagaaagaggaggagtacgctcagatcctggagaccctg
aaaaagcgagaggaggagcaggcagcctgcagagcggcgctctctgagagaagagatcta
gagacaagtaattcatctacagaaataacgagccacgaggaagaacacaatgctatggac
gactttgaggatgaccagcggccctgtcctccatgttggtatgccttcgccaacatcttc
ctgaagtggaactgctgtggctgttggctgtggctgaaaaagtggctctacatcatcgtc
atggacccatttgtcgaccttggcatcactatctgcattgtcctcaacactgtcttcatg
gccatggagcattatccgatgacagaggagtttgagaatcttctgagtgtcggaaattta
gtcttcacggggatcttcacagctgagatggtccttaaacttctggccatggacccatac
tactacttccaggtgggctggaacatctttgacagcatcatcgtcactatgagtctggtg
gagctgggattggccgacgttcagggtctctctgtgctgcgctccttcagattgatgcgg
gtgtttaagctggccaagtcatggccgaccctcagcatgttgatgaagatcatcgggaac
tctgtcggcgctctggggaacctgactctggttctggccatcatcgtcttcatctttgca
gtcgtcggcatgcagttgtttgggaagaactacaaagactgcgtgtgtcgcatttcgctt
gactgcgagcttcctcgttggcatatgtatgatttcttccatgccttcctcatcatcttc
agggtcctgtgtggagagtggattgagaccatgtgggactgcatggaggtctcaggtcaa
gtcatgtgtctgaccattttcatgatggttctagtcatcggaaacctggtggttctgaat
ctgttcctggccttgctactgagctcattcagcggagataatctggctgctccagatgaa
gaaggagaaaacaacttgcagattgccatgaaccggatcgacagggctgtggcctggata
aagacctggatcctggaacatatcagggctttaataggaaagaaagaacatgacaaccca
gtccaaaatgtggtcaacagtgaggaagaaagcagtacaagtaaggaggtcttggctctg
acctttgtgaccccagaccagacgatgtcagacaccaaagcccaagactgcaaccatgac
attctgacaagcaactaccacaacattgcctccctgagggtccccatcgctgaggccgag
tccgactttgagacccctgacaacgacgacgatgatgaagatgaggatgatgatgatgat
gaagaggatgaagaggaggaggagggggaggaacaaaaacactcccaatgtgacaattcg
tcagtctgcagcacggtacagaaacttcctgaagtccaggaggttgcagaggatgaggat
caagatgcgaacacgcctgaggactgctgcaccgacaagtgcttccgacgctgtccgtgc
ctggacatagacacgtcccagggcagaggaaagatgtggtctaacctcaggagaacctgt
ttctccatcgtagaacacaactactttgagaccttcattattttcatgatcctgctgagc
agtggagctctggcctttgaggacatcaacctggaacaacgtcgcgccataaagattgtt
ctggagtatgctgaccaggtgttcacctacgtgtttgtggtggagatgattctcaaatgg
gtcgcctatggatacaagacgtacttcaccaacgcctggtgctggctggacttcctcatt
gtagacgtgtctctggtgtctctgacagcaaacatcctgggatactctgacctgggagcc
atcaagtctctgaggactctgagagctctgcggcccctgagggccctgtctcgcttcgag
ggcatgagggtggtggtgaatgccctggttggagcgatcccctccatctttaacgtcctg
cttgtgtgtctgattttctggctgatcttcagcatcatgggagtgaatctgtttgcaggg
aagttttattactgttataatgagaccgctgaggagatgtttagccccgacgacgtccac
aacaagaccgagtgtttggctctgattgcagaaaacttcactgaggttcgctggaggaat
gttaaggtcaacttcgacaacgttgggatgggatacctgtccctgctgcaagtggccacg
tttaaaggatggatggacatcatgtacgcagccgtggactccacaaacgagggttctcag
cccaagtatgaggataatctgtacatgtacatttactttgtcggcttcatcatcttcggc
tccttcttcacccttaacctcttcatcggagtcatcatcgacaacttcaaccagcagaaa
gctaagatggggggaacggatctgttcatgacagaagagcagaagaaatattacaacgcc
atgaaaaaactgggctctaaaaaacctcagaaacctgttccacgacctcagaataagttc
cagggtctggtcttcgacctggtcaccacacagtttttcgacatcttcatcatggtgttg
atctgcctcaacatggtgaccatgatggtggagacggacgagcagagtgcggagaaagaa
aacctcctgtactggattaaccttgccttcatcgtcatcttcacctcagagtgcagtctg
aaggtcattgcgctccggcagcactactttgctgtcggctggaacatctttgactttgta
gtcgtcatcctgtccattgttggcctcctcctcgctgatatcatagagaagtattttgtc
tcgcccacgctcttccgtgtgatccgattggctcgcattggtcgagtccttcgtctcatt
cgtggcgccaaggggatccggacactgctgtttgccctgatgatgtcacttcctgccctc
tttaacatcggcctcctcctcttcctgatcatgttcatcttctccatcttcggaatgtct
aacttcgcctacgtgaagaaggaggcgatgatcgacgacatgtttaactttgagacgttt
gggaacagcatgatctgtttgtttatgatcaccacgtcagctggatgggacggtctgctg
aatcccatcatgaacatgccgcctgactgtgaccccgatgtggagaacccaggatcattg
gtcagagggaactgtggcagcccggccatcggcatcgtcttcttcaccacctacatcatt
atgtccttcctggtggtagtcaacatgtacatcgccatcatcctggagaacttcaacgtg
gccacggaggagagcgctgacccgctgtgtgaggacgacttcgagatgttctacgaaacc
tgggagaagttcgaccccagcgcctcacagttcatccaatacagtaagctgtccgatttc
tgcgacactctgaaggatcctctgaggattcccaaaccgaacaccatcaaactgatccaa
atggatctgcctctggttcctggagacaagatccactgtctggacatcctgcttgccctc
actgcgcaggttctaggtgattcaggagaaatggacgctctcaaagccagcatggaggag
aagttcatggccaacaacccctcgaaggtgtcatatgaaccaatcagcagcaccctgcgg
aggaaacaggaagaggtggcagcgacggtgatccagagagcgtacaggaaacacctcctg
cagcggacggtcaaactggcgtcctacaaatacagagaaaagacggagggacggcgagac
gagctgcaaccgccggagacagaaggactcctctttaaacgaatcagtcagttttacgga
gacaaggaggagacggaggagcctggctcaggtggtgaggatcctcctccccgggtgatg
ctgcagagcgagttcctccttcacgcggctcctcccctcagtgcccctgacttcctgcga
gatgaggacctgaaggagtctatcgtctga
DBGET
integrated database retrieval system
