Semicossyphus pulcher (California sheephead): 138604868
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Entry
138604868 CDS
T10596
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138604868 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138604868 (kdm2aa)
04121 Ubiquitin system [BR:
spul04121
]
138604868 (kdm2aa)
03036 Chromosome and associated proteins [BR:
spul03036
]
138604868 (kdm2aa)
Enzymes [BR:
spul01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
138604868 (kdm2aa)
Transcription factors [BR:
spul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
138604868 (kdm2aa)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138604868 (kdm2aa)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
138604868 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
138604868 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
PHD_4
zf-CXXC
HTH_Tnp_4
F-box-like
JHD
JmjC
F-box
Cupin_8
PHD
HTH_11
MarR_2
HTH_Crp_2
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
138604868
NCBI-ProteinID:
XP_069532996
LinkDB
All DBs
Position
Unknown
AA seq
1397 aa
AA seq
DB search
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRMFDLEEKVISQRFSSDRVLRMEGKDL
TYEFVQRGGLRDPILFERPEGLGLKMPDADFSVNDVKMFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPPQRDKLYNVISLEFSHTKLENLVTRPHTVDLIDWVDNMWPRHLKERQR
DSTNSITDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTPQNLE
LYENWVLSGKQGDVFLGDRVGDCQRIELKQGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPVKFRYPFYYEMCWYVLERYVFSMTRTSYLTPEFQKHSLGIG
LKKPASSEASSEQLKEEEEEVSDEEEQQVHVTPLELEGMWNLLGKLEALPSNKKCVPAGI
HNAPALITHIKALLKEHANDNPKLSYTGKPIVRWPKRPSWYQPPPPPPPPPRPKLATTPI
VPRPQKPASSMSVLRRRRVRCKRCEACMRPECGECNFCRDMKKFGGPGKLKQTCVLRQCL
SPGLPLSAVCEICKEPNQEETGDPSLILMECSNCAQIVHPACLTVQGEGLVNKDLPSCWE
CPKCVQGITDPEQAKGHKAEGLPLKRKSSSLLDARMAKIYRRQRHSHDGDDSASDDDDEA
SQRRKMVLHTRGGVHSARRGFSANRRGLLRGGSAHRGSRGGVVPPGSSSVLKLKRGMGVR
EAGRRGRGVRLRGGSRMQRRGDESEESDDEDDDDEEEDEEEEEEDSEDGGKERGHRQRRR
RRRTDDDDDEEEEDSEGQDFDPEEEEMDTLEDEEEEEEEGRWDSDPEPPVLLVSDLSDDL
MSGSYLTVTLQRPHKARRHSGSIVPKLEAAVGQRSSGGTAGQQAFIQRKTLTKPPRPKSS
DCQAESAAPRGPGRPRLRGNHGDRIGSSSEEEEAPPTSSLSPPSLLSLPSFKDVGNEGGG
DKEVWVSVFRFLDRAELLTCMTVCKAWYKWSCDKRLWSHVDVSRCCPLSNQSLAGIIKRQ
PSSLDLSWTPLAKRQLTCLLTRLPDPSMGGSNTRGSYDEAHIDLPTHCDAETQWVYPSVF
DHGYASQTPLQLRTPICDVGTQCSEPTALYLTLLWNHRLCQLYTGLSLDAFQFLAEDLTT
AYNNSFQLHPWDQLLMTLMKLRLNLLQGDLAERFGISRSIVSQVISCWLDLMEEKMSCCI
PWLSRETIQATMPQCFREHYPNTTCVLDCSETPLQKPRNLDWRGESNSHYYGQNAIKYLI
STAPCGLIMYISPAYGGMCSDEFITATSGFLEYLHPGDEVMADRGFTIKDLLYEREVKLV
SPAFTKRGEQLSEEDTTNTGSIANVQVHRERVIRRLKNFRILSQAVPTNLAPKMNNILRI
CAALCNLGDDVISDVDE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcaaagccccggtacagcaagcggctgagggccggtacccgtcggcgttac
catgacgacggcatctcagatgaggagattgacgggcggaggatgtttgacctggaggag
aaggtcatcagtcagaggttcagctctgaccgtgtcctccgcatggaggggaaagacctg
acgtacgagtttgtgcagagaggaggcctgagggaccccatcctgttcgagaggcccgag
ggactgggactcaagatgcctgatgcagacttcagtgtgaacgatgtgaagatgtttgtt
ggtagcagacgtatgatcgatgtgatggatgttagcactcagaaggggacggagatgtcc
atggctcagtggacccgctactatgagacgcccccccctcagagagacaagctgtacaat
gtgatcagtctggagttcagccacaccaagctggagaacctggtcaccagaccccacact
gtggatctgatagactgggtggacaacatgtggcctcgacacctgaaggagcgacagaga
gactccacaaactccatcactgacatgcagtaccccaaagttcagaagtactgtctgatg
agtgtggaggggtgctacacagacttccacattgactttggagggacatcagtgtggtac
cacatcctgagaggcagcaaggtgttctggctgatcccgcccacccctcagaacctggag
ctgtatgagaactgggttctgtcggggaagcagggcgatgtgttcctgggagaccgtgtg
ggtgactgtcagaggatcgagctgaagcagggctgcaccttcatcatcccctcaggctgg
atccacgccgtctacactccagtggactcaatggtgtttggaggaaacttcctgcacagc
ttcaacatccccatgcagctcaacatctgtaacatcgaggacagaacacgggtcccggtg
aagtttcgttacccgttctactacgagatgtgctggtacgtgttggagcgttacgtgttc
agcatgacgaggacctcgtacctcacgccagagttccagaaacactcgctgggcatcggt
ctgaagaaacctgccagctctgaagcctcctctgagcagctgaaggaggaggaggaggag
gtcagtgatgaagaggagcagcaggttcatgtgactcctctggagctggaggggatgtgg
aacctgttgggaaaactggaggctctgccctccaacaagaagtgtgtccctgcaggaata
cacaatgccccggctctcatcacacacatcaaggctcttcttaaggaacacgccaacgac
aatcccaaactttcgtacacggggaaacccatcgtcaggtggcccaagaggccctcctgg
taccagcctcctcctcctccacctcctcctcctcgccctaaactggccaccacccccatc
gtgccccgcccacagaagcccgcctcctccatgtctgtgctgagacgccgcagggtcagg
tgtaagcggtgtgaggcgtgtatgcggcctgagtgtggagagtgtaacttctgcagagat
atgaagaagtttggaggaccgggcaaactcaaacagacctgtgtgctccgacagtgcctc
tctcccggcctccctctgtctgccgtgtgtgagatctgtaaggagcccaaccaggaggag
accggagacccctccctcattctgatggagtgctccaactgtgcacagatagttcatcct
gcctgcctcacggttcagggagaaggactggtgaacaaagacctgcccagctgctgggag
tgtcccaagtgtgtgcagggcatcaccgacccagagcaagctaaaggacacaaagctgaa
ggcctccctctgaagcgtaaatcttcctccctgttggacgctcgtatggccaagatctac
cgccgacagagacacagccacgacggggacgactctgccagcgatgatgatgatgaagcc
tctcagaggaggaagatggtgctccacactcgagggggggtccactctgcaaggaggggc
ttcagtgctaacaggaggggcctgcttagaggaggctccgcccacagagggagcagaggc
ggagtcgtgcctcctggttcctcgtctgtccttaaacttaagcgagggatgggtgtgagg
gaagcggggcgcaggggaagaggggtgaggctgcgggggggctcgaggatgcagcgaaga
ggagacgagtcagaggagtcggacgatgaagacgatgatgatgaagaggaggatgaggag
gaggaagaggaggacagtgaagacggaggcaaagagcgtggccatcgtcaacgacggagg
aggcgcagaactgatgatgatgatgatgaggaggaggaggacagtgaggggcaggacttc
gaccctgaggaggaggagatggacacgctggaggatgaagaggaggaggaggaggaaggg
cgctgggattcagacccagaacctccggtcctcctggtgtccgacctgagcgacgacctg
atgagtggctcctacctgaccgtgactctgcagcgcccccacaaggcccggaggcacagt
ggctccatcgttccaaagctggaggcagctgtgggtcagaggtcatcagggggcactgca
ggtcagcaggccttcatccagaggaaaactctgaccaaaccaccccgaccaaagagctca
gactgccaagctgagagcgctgccccacgaggacccggcaggcctcgtctgcgtggtaac
catggtgacagaattgggtcatcctcagaggaagaggaggctcctcccacctcttccctc
tctcccccctccctgctgtctctgccctccttcaaggacgtaggaaacgaggggggagga
gacaaggaggtgtgggtgtctgtgttcaggttcctggaccgagccgagctgctcacctgc
atgaccgtctgcaaggcctggtacaagtggagctgtgacaagcgtctgtggtctcatgtg
gacgtgagtcgttgctgtcctctctctaatcagtctctggcagggatcatcaaacgtcag
ccgtcctcactggacctgtcgtggaccccactggccaagagacagctcacctgtctgctc
accaggctgccagatccatcgatgggcggcagcaacacacgggggagttatgatgaagcc
cacatcgacctgcctacgcactgtgatgcagaaacacaatgggtatatccatctgtcttt
gaccacggctacgcatcccaaacaccactccagctgagaacccccatatgtgatgtggga
acacaatgcagtgagccgactgcgctgtacttaactctgttgtggaaccaccgcctgtgc
cagctttacacagggttgtcattggatgcattccaattcttggctgaggacctcaccaca
gcgtacaacaacagcttccaactacacccttgggatcagctcctgatgaccctgatgaag
ctgcgtctcaacctactgcagggggaccttgctgaaaggtttggcatctctcggtccatc
gtcagccaggtgatttcctgctggctcgacctcatggaggagaaaatgagctgttgcata
ccatggctttccagggagacaatccaggcaacaatgcctcagtgttttagggaacattac
ccaaacacaacctgtgtgcttgactgttcagagacgccccttcagaagccacgtaacctt
gactggagaggcgagtccaacagccattactacggacagaacgccatcaaatacctcatc
tcaactgccccgtgtggactgatcatgtacatctcgccagcgtatggaggaatgtgtagt
gatgaattcataactgcaacttcagggttcctggaatatctccatccaggtgatgaagtc
atggctgacagaggcttcaccatcaaagatctcctttatgaaagggaggtgaaactcgtc
agtccagcattcaccaagagaggcgagcaactgtccgaggaggataccaccaacacgggg
agcatcgccaacgtacaggtccacagggagcgggtcatacgccgactgaagaacttcaga
atcctctctcaagcggttccaacaaacctcgcccctaaaatgaacaacattctgagaatt
tgtgcggccctgtgtaacctcggtgacgatgtgatctctgatgtagatgagtaa
DBGET
integrated database retrieval system
