Semicossyphus pulcher (California sheephead): 138605861
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Entry
138605861 CDS
T10596
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138605861 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spul01007
]
138605861 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spul03016
]
138605861 (iars1)
Enzymes [BR:
spul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
138605861 (iars1)
Amino acid related enzymes [BR:
spul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138605861 (iars1)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138605861 (iars1)
Prokaryotic type
Other AARSs
138605861 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
Motif
Other DBs
NCBI-GeneID:
138605861
NCBI-ProteinID:
XP_069534416
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MVERVPESINFPSEEEKILQLWKDKDCFQECLKQSKNRPKYAFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWENSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLVGDEEVALIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNTTNKTYIMMEARLGALFKSEGEYTLLDKFPGKTLKGKKYKPLFQYFSECG
ETGAFQVVTDNYVKEEEGTGVVHQAPYFGADDHRVCTEFNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLVNASNFKHSYPFCWRSDTPLIYKAVPSWFIRVE
NMVEKLLENNGKCYWVPEFVREKRFGNWLRDARDWAVSRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLVVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDDVQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDTGSIHYLMVPQVRESLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLQKYILEELNVRQLTMSTDKDKYGISLRAEPDHMV
LGKRLKGAFKAITASIKELTSEQLESFQKTGTIMVDGHELHEEDLRLMYTFNQSSGSAAQ
YEAHSDAQVLVLLDVTPDQSMLDEGVAREVINRVQKLRKKGHLVPSDEISVYYRCQPEGE
YLSSVIQAHTDFILATTKAPLLPFPVPKTASVIIEEKTQLKGSDLELIIVKGSSAPRAQL
NGPACTYVNLRVKVDNKEQEGVVLLENPKGDNRLDWDKLKKVCSSIFGTNNSQLRFFNGG
TELTSKMDLQALNGKTLSVTSGSSSPGSAPTTDTLLCPYVNLLLCNAQPAECQSGDAGTL
LLVNPVGKNGLDHSGLLSEAAKVFGLRSRRLKLYLDQDLTQELPADSSVKSLDTKSLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcgagtccctgagtccatcaactttccctctgaggaggagaagatcctgcag
ttgtggaaggacaaggactgcttccaggaatgcctcaaacagtccaagaacaggcccaag
tacgctttctacgatggccctccttttgccacaggtctcccacactatgggcacattctg
gccggcaccatcaaggacattgtcacccgctttgctcaccagagcggcttccacgtggac
cggcgctttggctgggactgtcacggcctgcctgtggagtatgagattgataagactttg
gggattaaagggcctgaggatgtggccaagatgggcatcgctgagtacaacaagcagtgc
agaaacattgtcatgagatactccaacgagtgggagaattcagtgaggcgaatgggaagg
tggatcgacttcaaaaacgactacaagaccctctacccctggttcatggagactgtctgg
tgggtgttcaaacagctgtacgacaagggactggtgtacagaggtgtcaaagtcatgcct
ttctccactgcctgcaacaccccgctgtccaacttcgagtcccaccagaactacaaggat
gttcaagacccatctgtcatcgtcaacttcccattggttggcgacgaggaagtggctttg
atcgcctggacgaccacaccctggacactgccgagtaacctggccctctgtgttaacccg
gagttcctgtatgtgaaggtcaaagataacaccacaaacaaaacctacatcatgatggag
gccaggctgggagctctgtttaagtctgagggcgagtacactctcctggacaagtttcct
ggcaagacgctgaaagggaaaaaatacaagcctctcttccagtacttctctgagtgtggg
gagacgggagcgttccaggtggtgactgataactacgtcaaggaggaagagggtacagga
gtggtccaccaggcaccttactttggagctgatgatcacagggtgtgcacagaattcaac
atcatccagagggaccaggctcctatctgccctgtggacgcctcgggctgcttcacttca
gaggtcaccgacttcgcgggacagtatgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaggagaagggtcgcctcgtcaatgccagcaatttcaaacatagttaccccttctgc
tggagatctgacacacccctgatctacaaagccgtcccaagctggtttatccgagtggaa
aacatggtggagaaactgctggaaaacaatgggaaatgttactgggtgccagagtttgta
cgtgagaagcgattcgggaactggctgagagacgcacgagactgggcggtctcgaggaac
cgctactggggaacgccgatcccgctctgggtcagcgacgacttcgaggaggtggtgtgt
gtcggctccatggctgaactcgaggagctcaccggagtcaaagtaactgatctgcatcgg
gagagcatcgacagtctgaccatcccgtcgcggtgtggtaagggcgtgctgcgtagggtc
acggaggtgtttgactgctggttcgagagcggcagcatgccttacgcccaggtccactac
cccttcgaaaacaggaaggagtttgaggacactttccccgcagacttcatcgctgaaggc
atcgaccagacgagaggatggttctacaccctgctggtgctctccacggcgctgtttggc
aagccgccctttaagaatgtcatcgttaacggacttgtactcgctagcgatggacagaag
atgagcaagcgcaagaagaactacccggatccaggactcgtggtgcagaactatggagct
gatgccctcagactgtacctcatcaactctcccgtggtgagagcagagaacctgcgtttc
aaagaggagggtgtgcgagacgtgttgaaggatgtcttcttgccgtggtataacgcctac
cgcttcctggtgcagaacgtgcaaaggttacagaaggaggatgacgttcagttcctgtac
aatgaaaacacggcaaagcagagtgacaacatcatggacaaatggatccagtccttcaca
cagtctctcatccagttcttcaaggctgagatggacgcttaccgcctgtatactgtcgtg
cctcgcctggttaagtttgtggacatgctcaccaactggtacgtgaggaccaacagacgc
cgcctaaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttttccatgtgcaggctgatggctcccttcacaccgttcattacggagatgatg
taccaaaatctgcgtcacctcatcgaccccgcctcagtggaagagaaggacaccggcagc
atccactatctcatggtgccacaagtcagggagagtttgattgacaagcgcatcgagagt
gctgtctcacagatgcagtctgtgattgagctgggcagagtgattcgagacaggaagacc
ctgcccgtcaagtacccattgaaagaggtggtagtaattcaccaggacccagaggctctg
aaagacatccagtccctgcagaaatacatcctggaagagctgaatgtgcgacagttgacg
atgtcaacagacaaggacaagtacggcatcagtctgagagctgagccagaccacatggtg
ctgggcaagagactaaagggggccttcaaagccatcactgcttctattaaggagctcacc
agcgaacagctcgagtccttccagaagacaggaaccatcatggtggacggccatgagctc
cacgaggaggacctgaggctgatgtacactttcaaccagagctccggctcagccgcacag
tatgaagcacactctgatgcacaggtcctggtgctgctggatgtcacccccgaccagtcc
atgctggatgaaggcgttgcccgggaggtcatcaaccgcgttcagaaactacgcaagaag
ggccatttggtgccatcagatgagataagtgtgtactaccgctgccagccagagggggag
tacttgagctctgtgatccaggctcacacagacttcatcctggctaccaccaaggctcca
ctgctgcccttccccgtcccaaagactgccagcgtcatcatagaagaaaagactcagctg
aagggctcagacttggagttaatcatagtaaagggatcttcagctccccgggctcagcta
aatggaccagcttgcacctacgtgaacctcagggtgaaggtcgacaacaaagaacaagag
ggagtcgtgctgttggagaaccccaaaggggataacagactcgactgggacaagctgaag
aaagtgtgcagcagcatctttggcaccaataacagccagctaagattcttcaatggcggg
actgagctgaccagtaaaatggaccttcaggctctcaacggtaaaaccttgtcagtgact
tcaggctcgtcctcccctggctccgcccccaccaccgacaccctcctgtgtccctacgtt
aaccttctgctctgcaacgcacaaccagctgagtgccagtcaggagatgcaggcaccctc
ctgctggtgaacccggtgggcaagaatgggcttgaccactcaggtctgctgtctgaggct
gccaaggttttcggcctccgcagcagacggctcaaactctacctggaccaggacctcacc
caggagctgccggctgattcttcagtgaaatctctagacaccaaaagtctgtttgtcaga
gttcttccaacaactgctgaggcataa
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integrated database retrieval system
