Semicossyphus pulcher (California sheephead): 138610278
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Entry
138610278 CDS
T10596
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00310
Lysine degradation
spul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138610278 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138610278 (prdm6)
03036 Chromosome and associated proteins [BR:
spul03036
]
138610278 (prdm6)
Enzymes [BR:
spul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
138610278 (prdm6)
Transcription factors [BR:
spul03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
138610278 (prdm6)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
138610278 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
138610278
NCBI-ProteinID:
XP_069539106
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKPPLAPPPPPPDRLSIPVDSLRQSRLHS
HLLASSHCTSSSSSSTSSSSAALTPSSSISISTSAGISQLPVPQQIALFGQALAPVCVGP
GGPGGGPGGGGGGGDLIVVVPPENQQQQGHNNPAAAAAGLLHQAKEQSCGGVGVVSSSVK
SGGGGGGEEGGKGARFKLTSEELDYYLYGQQRMEIIPLSNHTGEANNRCDMCADNRNGEC
PMHGPLHSLRRLVGTSSTAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQ
GTWIGPFQGVPLLLDKLQSGAVRNTRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCAR
HCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPGT
VVETMSRQESLQSFSKNGKPSSSSSTTPSIAPIRSSMVFPHSPCSRSFSLLDKVGVGVQS
DSSFGQLGSKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDR
PYQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKC
ERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctctttcctcaggcgcagctgaagcctcctctggccccgccgccg
cctcctcctgaccgcctctccatccctgtggacagcctgcgccagtcccgcctgcacagc
cacctcctggcctcctcacactgcacctcctcctcctcttcttctacgtcttcttcttca
gcagctctcacgccatcctcctccatctccatctccacctccgcagggatctcccagctg
cccgtgccccagcagatcgctctcttcgggcaggcgttggcccccgtgtgtgtagggcca
ggaggacccggaggaggaccaggaggaggtggaggaggaggagacctgatcgtggtcgtc
cccccggagaaccagcagcagcagggtcacaacaacccggcagcagcagcagccgggctc
ctccatcaggccaaagagcagagctgtgggggggtcggggtggtgtcgtccagcgtgaag
agcggaggaggaggaggaggagaggagggaggcaaaggagcgaggttcaagctgacgtcg
gaggagctggactactacctgtacggacagcagaggatggagatcatcccgctgagcaac
cacacgggagaggccaacaaccgctgtgacatgtgtgccgacaacaggaacggcgagtgt
ccgatgcacggccctcttcactctctgcggcgactcgtcggcaccagcagcacggccgct
cccgtcaccctgcccgacgtccctgattggctcagagacctgccgcgagaggtgtgtctg
tgcaccagcaccgttcctggtctgggttacgggatctgtgcggcacagaggatccctcag
gggacctggatcggcccgtttcagggagtccctctgctgctcgacaagctgcagtccgga
gccgtcaggaacacccgacacctgtgggagatctacgatgcagaggggaccttacagcac
tttattgatggtaatgatcccagtaagtccagctggatgaggtatatccgctgtgcccga
cactgtggggagcagaacatgatggttgtacaatacaggtcctgtatcttctacagagcg
tgtatggatatccccagaggaacagagctgctggtttggtacaacgactcctacacctcg
ttcttcggcatcccgctgcagtgcatcgctcaggacgaaaacttaaacgtcccaggcaca
gtggtggaaaccatgagtaggcaggagtctctccaatccttcagcaagaacggcaaaccc
tcctcttcctcctctaccaccccctctatcgcccccatcaggagctcaatggtcttccct
cactccccctgctctaggagtttctctctgttggacaaggttggggttggggttcagtca
gactccagttttggccagctggggtcaaagaaccagcgagtcctggccagcccgacctcc
accagtcagctgagcagtgatttcagcgactggcacctgtggaagtgtggccagtgcttc
aaaaccttcacccagaggatcctgctgcagatgcacgtctgtccgcagaatccagacaga
ccgtaccagtgtggccactgctcccagtccttctctcagccgtcagacctgaggaaccac
gtggtgactcactccagtgaccgacccttcaaatgtggatactgcggccgcgcgttcgct
ggggccacgacgctcaacaaccacatccgcacgcacaccggggagaagccgttcaagtgc
gagcgctgcgaccgcagtttcacacaggccactcagctcagccgccatcagcgacttccc
aacgagtgtaaaccggtgaacgagagcagcgagtccatcgaggtggattaa
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integrated database retrieval system
