Sphingopyxis sp. USTB-05: KEC45_12810
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Entry
KEC45_12810 CDS
T10625
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus00300
Lysine biosynthesis
spus00550
Peptidoglycan biosynthesis
spus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KEC45_12810
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KEC45_12810
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spus01011
]
KEC45_12810
Enzymes [BR:
spus01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KEC45_12810
Peptidoglycan biosynthesis and degradation proteins [BR:
spus01011
]
Precursor biosynthesis
Amino acid ligase
KEC45_12810
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
USI75653
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Position
complement(2764070..2765509)
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AA seq
479 aa
AA seq
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MRLAALLEDQSLEGSDPVVTGLAIDHRKVAPGTVFGAFVGEKFNGEDFIAAAVDAGAVAI
VGRPEAQVEGAVHIADANPRRAFAHIAARFFHRFPATCVAVTGTNGKTSTVEMTRQLWRM
AGFNAASIGTLGITTSQDSASTGLTTPDIVTFLSNMSGLAVEGVTHAAFEASSHGLDQYR
TEGLPVKAAAFTNLSHDHLDYHGTMDAYLAAKLRLFSEVVEPGGAAVVWADDEYSAPVIA
AAKARGVRLLTVGTKGETLRLVSREPTQLGQALVIAAGDLTQKVDLPLIGAYQVANALVS
AALVIATGGDAAQTLGNLARLQPVRGRLERAAIARTGAPVYVDYAHTPDAIEAALDALRP
HANGRLILVFGAGGDRDQAKRPEMGKVAAAKADVLIITDDNPRGEDPAVIRDAIAAAAPD
ARVIGDRRAAIAAAIAEARSDDIVCIAGKGHEQGQIVGRGDDMRVIPFDDVTVAREVAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgccgcgctgctcgaagatcagtcgctggagggcagcgatcccgtcgttacg
gggctcgccatcgaccatcgcaaggtcgcgccgggcacggtcttcggcgcattcgtcggc
gaaaaattcaatggcgaggactttattgcagccgccgttgacgccggggcggtggcaatc
gttggtcgtcccgaggcgcaggtcgagggtgcggtgcatatcgccgatgccaacccgcgc
cgggccttcgcgcatatcgcggcgcgcttcttccatcgttttcccgcgacctgcgtcgcg
gtgacgggcacgaacggaaagacctcgaccgtcgagatgacgcgccagctctggcggatg
gcggggttcaacgccgcgtcgattggcacgcttggcatcacgacgtcacaggacagcgca
tccaccgggctgacgaccccagacatcgtcactttcctctcgaacatgtcgggtctcgcg
gtcgagggggtcacccacgccgcgttcgaggcgtcgagtcacggtctcgaccagtatcgc
accgagggtctgccggtgaaggcggctgctttcaccaacctcagccacgaccatctcgac
tatcacggcacgatggacgcctatctcgcggccaagttgcggctcttctccgaagtcgtc
gagcccggtggtgcggcggtggtgtgggccgacgacgaatattcggcgccggtgatcgcg
gctgcgaaagcgcgcggcgtccgtctgctgaccgtcggtacaaagggcgaaacacttcgc
cttgtctcgcgcgagccgacgcagctcggccaggcgctcgtcatcgcggcgggcgatctg
acgcaaaaggtcgatctgccgctgattggagcctatcaggttgcgaacgcgctcgtgtcg
gcggccctcgtgatcgcgaccggcggcgacgctgcgcagacgctcggcaatctcgcccgg
ctccagccggtgcgcggccgcctcgaacgcgccgcgatcgcccgaaccggtgccccggtc
tatgtcgactatgcccacacgcccgacgcgatcgaagcggcgctcgacgcgctgcgcccg
catgcgaacggccgcctgatcctcgttttcggggccggcggcgaccgcgaccaggcgaag
cgcccggaaatgggcaaagttgccgcagccaaggccgacgtgctgatcatcaccgacgac
aatccacgcggcgaagatcccgccgtcatccgcgatgcgatcgcggccgcggcacccgac
gcgcgggtcatcggcgaccgccgtgccgcgattgccgccgccatcgccgaagcgcgctcc
gacgatatcgtctgcatcgcgggcaaggggcacgagcagggccagattgtcggtcgcggt
gacgacatgcgtgtcattcccttcgacgatgtgaccgtcgcacgcgaggtggcggcatga
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