Sphingopyxis sp. USTB-05: KEC45_14235
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Entry
KEC45_14235 CDS
T10625
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KEC45_14235 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spus03400
]
KEC45_14235 (nth)
Enzymes [BR:
spus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KEC45_14235 (nth)
DNA repair and recombination proteins [BR:
spus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KEC45_14235 (nth)
Prokaryotic type
KEC45_14235 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
USI75922
LinkDB
All DBs
Position
complement(3071132..3071788)
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AA seq
218 aa
AA seq
DB search
MKKADIFEFYRRLAELNPSPETELEFDNTYQLLVAVVLSAQATDVGVNKATRKLFQEVKT
PQQMLDLGEEGLKQHIKTIGLFNGKAKNVIALSEILVREFHGEVPADRDTLVELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAPGKTVLAVEKQLEKNTPAPFRVGAHHWLI
LHGRYICKARTPECWRCPVDDLCRYKPKTPAPKAKKAA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggccgatatcttcgaattttatcgtcggcttgccgagcttaacccaagtccg
gagaccgagctggagttcgacaacacgtatcagttgctcgtcgcggtcgtgctgtcggcg
caggcgaccgatgtcggcgtgaacaaggcgacgcggaaactgtttcaggaggtaaagacc
ccccagcaaatgctcgaccttggcgaggaggggctgaagcagcacatcaagacgatcggg
ctgttcaacggcaaggcaaagaatgtcatcgcgctcagcgaaatcctcgtccgcgagttt
cacggtgaggtgcccgccgaccgcgacacgctggtcgagttgcccggcgtcgggcgcaag
accgccaatgtcgtgatgaactgtgccttcggggccgagaccttcgcggtcgacacccat
atcttccgcgtcggaaatcgcacgggtcttgcgccgggcaagacggttcttgcggtcgaa
aagcagctcgaaaaaaacacgcccgcgcccttccgcgtcggcgcgcatcactggctgatc
ctccacggccgctatatctgcaaggcgcgcacccccgaatgctggcggtgtccggtcgac
gacctctgccgttacaagcccaagacgccggcgccgaaagcaaaaaaggcggcgtga
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