Sphingopyxis sp. USTB-05: KEC45_19810
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Entry
KEC45_19810 CDS
T10625
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spus Sphingopyxis sp. USTB-05
Pathway
spus01501
beta-Lactam resistance
spus01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spus00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KEC45_19810
01503 Cationic antimicrobial peptide (CAMP) resistance
KEC45_19810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spus03036
]
KEC45_19810
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spus02000
]
KEC45_19810
01504 Antimicrobial resistance genes [BR:
spus01504
]
KEC45_19810
Chromosome and associated proteins [BR:
spus03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KEC45_19810
Transporters [BR:
spus02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KEC45_19810
Antimicrobial resistance genes [BR:
spus01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KEC45_19810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
CzcB_C
CLIPPER_2
BT_2262-like_C
Motif
Other DBs
NCBI-ProteinID:
USI76954
LinkDB
All DBs
Position
complement(4265446..4266627)
Genome browser
AA seq
393 aa
AA seq
DB search
MLDKRPLLRVGALCAIALSLAACTAEEEKGGRGAPEVGYVTVKVEPVPVTSSLGARTVAF
ETSEVRPQVNGLIRHRLFTEGGFVRAGQPLYQIDASLYQAGVDQAAANLASARASAQAAE
ERARRLEPLAKMQAVAEQDYTDALAQARMARAAIAQNGAALETARINLRFATITAPISGR
IGRSLVTPGGLVSASQATPLAVIQQTDPMYVDMQQSSAELTTLRQAIESGGVTAGSTSVR
LRMEDGSAYPFAGTVQFSDVTVNEATGTVTLRARFPNPRGILLPGMFVTALFDQAVNPKA
ILLPQAAVQRDFDGSAFVYLVGKDNKAARRKIVADRTSGPNWVITDGLKPGERVITQGIG
NLRQGAPIRPVPANSAQRVGAPAKGGDAQAKGK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaagaggccgctgctccgcgtcggagcgctgtgcgccatcgcgctgtcgttg
gccgcctgcactgcggaagaagaaaagggcggccgcggcgcgcccgaggtcggctatgtt
accgtcaaggtcgagccggtgcccgtgacctcgtcgctcggcgcgcgcaccgtcgcgttc
gagacgagcgaagtgcgtccgcaggtgaacggcctgatccgccaccgcctgttcaccgaa
ggcggcttcgtccgcgcgggtcagccgctttatcagatcgacgcgagcctctatcaggcc
ggcgtcgatcaggccgccgccaatctggcgagcgcgcgcgccagcgcgcaggccgccgag
gaacgcgcacggcggctcgaaccgctcgcaaagatgcaagcggtcgccgagcaggattat
accgatgcgcttgcacaggcgcgcatggcgcgagccgcaatcgcccagaatggcgccgca
ctagaaaccgcgcgcatcaacttgcgcttcgcgacgattaccgcgccgatcagcggccgg
atcgggcgcagccttgtcacgccgggcggactcgtgagcgccagccaggcgaccccgctc
gcggtgatccagcaaaccgacccgatgtatgtcgacatgcagcagtcgagcgcggagctt
acgacgttgcggcaggcgatcgaaagcggcggagtgaccgcgggcagcacctcggtccgg
ctgcgcatggaggatggcagcgcctatccctttgccggcaccgttcagttttccgatgtc
acggtgaacgaggcgacgggcacggtcacgctgcgcgcgcgcttccccaacccccggggc
atattgctgcccggtatgttcgtgaccgccctgttcgatcaggcggtgaacccgaaagca
atcctgctgccgcaggccgcggtgcagcgcgatttcgacgggtcggcctttgtctatctg
gtcggcaaggacaataaggcagcccggcgcaagatcgtcgccgaccgcacgtccggcccc
aactgggtcattaccgacgggctgaagcccggcgagcgggtgattacgcagggcatcggc
aatctgcggcagggtgcaccgatccgcccggtcccggcgaacagcgcgcagcgcgtcggc
gcaccggccaagggcggcgacgcccaggcaaagggcaagtaa
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