Sphingobium sp. WTD-1: N6H05_09430
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Entry
N6H05_09430 CDS
T10837
Name
(GenBank) TIM barrel protein
KO
K26400
3-dehydroshikimate dehydratase [EC:
4.2.1.118
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00400
Phenylalanine, tyrosine and tryptophan biosynthesis
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
N6H05_09430
Enzymes [BR:
spwt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.118 3-dehydroshikimate dehydratase
N6H05_09430
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Gene cluster
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Motif
Pfam:
AP_endonuc_2
Glyoxalase_5
Glyoxalase_4
Glyoxalase_3
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
WIA57991
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Position
1920787..1922658
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AA seq
623 aa
AA seq
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MSNAIATVSLRGTLEEKLRAAAAAGFAGVEIFENDLIGSELAPRDVRRMLDDLGLACMLY
QPFRDFEGMPGALRQRAFDRAERKFDLMGELGTDRILVCSNCSPASLGERERIVDDFRDL
GERAAKRGIFVGYEALAWGRHVFDHRDVWSIVEQVDHPHIGIILDSFHSLSRKIPSDSIR
DIRGDKIVFVQLADAPLLDMDLLYWSRHFRNLPGQGGLDVAGFVAEILATGYDGPLSLEI
FNDRFRSNAATLVAEDGHRSLDYVRDAALRQLGRPSTMPAPEPVLGAEFVEFTTASADSA
RLGRTLATLGFSLAGEHRQKKVTRWRQDGVNLVVNAEPKGFASAYRAAHGSSICAIGVRV
RDKAAVQARAAALGINAYSAEGRPGRMAMPALRGVGGSLVYLIDDNEVEGLWAREFQAIE
AEPDAPVHAHGFDHLAAVVHNDEFLSWQLYWRALFGLEAKAAQDVIDPSGLVYSQALQAP
DGAFRVTLNASDARETLSSRFLDQGIGGGYQHVALATDDIFATAQALRDEGAAVLTIPAN
YYADIAARFGFDDALVARMQALGILYDEDADGHGFWQLYSRAFDKLFFFEFVQRAAGYMG
YGAPNAGVRLAAQNRFRAENPVD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgccatcgccaccgtctcgctgcgcggcacgctcgaagagaaattgcgcgcc
gctgccgcggccggctttgccggggtcgagatattcgagaatgacctgatcgggtcggaa
ctggcgccgcgggacgtgcggcgcatgctggacgatctggggcttgcctgcatgctctac
cagcccttccgcgatttcgaggggatgccgggcgcgctgcgccagcgcgccttcgaccgg
gccgagcgcaagttcgacctgatgggcgaactgggcaccgatcgcatcctggtctgctcc
aactgctcgcccgcctcgctgggggagcgggagcggatcgtcgacgatttccgggacctc
ggcgagcgggcggccaagcgcgggatatttgtcggctatgaggcgctggcctgggggcga
catgtgttcgatcatcgcgatgtctggtcgatcgtagagcaggtcgaccatccccatatc
ggcatcatcctcgacagcttccattcgctgtcgcgcaagattccgagtgacagcatccgc
gatatccgtggcgacaagatcgtcttcgtccaactcgccgatgcgccactgctcgacatg
gacctgctctactggagccgccatttccgcaacctgccggggcagggcgggctggatgtc
gccggcttcgtcgcggagatattggccaccggctatgacgggccgttgtcgctggaaatc
ttcaacgaccggttccgctccaatgccgcgacgctggtggcggaggacgggcatcgttcg
ctcgactatgtgcgcgacgcagcgctgcgacagttggggcgcccgtcgaccatgcccgcg
ccggagccggtgctgggcgccgagttcgtggaattcaccaccgccagcgccgattccgcg
cggctgggccgcacgctggcgacactgggcttcagtcttgccggcgagcaccgccagaag
aaggtgacgcgatggcgccaggacggcgtcaacctggtggtcaatgccgaacccaagggc
tttgccagcgcctatcgtgcggcgcatggatcgtccatctgcgcgatcggcgtgcgggtg
agggacaaggcggcggtgcaggcgcgcgcagcggcgctggggatcaatgcctatagcgcg
gaaggccgccccggccgcatggcgatgccggcgctgcgcggggtcggcggcagcctggtc
tatctgatcgacgataatgaggtcgaagggctgtgggcgcgcgagttccaggcgatcgag
gcggaacccgatgcgccggtccatgcccatggcttcgaccatctcgccgccgtcgtccat
aatgacgaattcctgtcctggcagctttactggcgcgccctgttcgggctggaggccaag
gcggcgcaggatgtgatcgatccgtcgggactggtgtatagccaggccttgcaggcgccc
gacggcgccttccgcgtgacgctcaatgcgtcggatgcgcgcgagacgctatcgtcccgc
ttcctcgatcaggggattggcggcggctatcagcatgtggcgctggcgaccgacgatatc
ttcgcgacggcgcaggcactgcgcgatgagggcgcggcggtgctgaccattccggccaat
tattatgcggacattgccgcccgcttcggctttgacgatgcgctggtggcgcggatgcag
gcgctgggcatcctctatgacgaggatgccgatggccacggcttctggcagctctacagc
cgcgctttcgacaagctgttcttcttcgagttcgttcagcgcgcggccggctatatgggc
tatggcgcgcccaatgccggtgtgcggctggccgcgcagaaccggttccgcgccgagaac
ccggttgattga
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