Sphingobium sp. WTD-1: N6H05_23540
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Entry
N6H05_23540 CDS
T10837
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
spwt Sphingobium sp. WTD-1
Pathway
spwt00270
Cysteine and methionine metabolism
spwt00450
Selenocompound metabolism
spwt00670
One carbon pool by folate
spwt01100
Metabolic pathways
spwt01110
Biosynthesis of secondary metabolites
spwt01230
Biosynthesis of amino acids
spwt04980
Cobalamin transport and metabolism
spwt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spwt00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
N6H05_23540 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
N6H05_23540 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N6H05_23540 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N6H05_23540 (metH)
04980 Cobalamin transport and metabolism
N6H05_23540 (metH)
Enzymes [BR:
spwt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
N6H05_23540 (metH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
WIA55952
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Position
complement(4745847..4748447)
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AA seq
866 aa
AA seq
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MTQQSTATFVNIGERTNVTGSAKFKKLIMAGDYAAAIDIAREQVENGAQIVDVNMDEGLL
DAVEAMTTFLKLMTSEPDISRVPVMIDSSKWEVIEAGLKCVSGKPVVNSISMKEGEEAFL
HHARLCMAYGAAVVVMAFDETGQADTQARKVEICERAYKLLMTIGFPPEDIIFDPNIFAV
ATGIEEHNNYGVDFIEACREIKQRCPHVHISGGLSNFSFSFRGNEPVRRAMHSVFLYHAI
PAGLDMAIVNAGQLDVYDAIDPALRQACEDVLLNSDPEAGDRLVALAESFKGKDAASEKA
AQEWRGWPVAKRLEHALVKGIDMYVVEDTEECRLAAEKPIQVIEGPLMDGMNVVGDLFGA
GKMFLPQVVKSARVMKKAVAHLLPYIEAAKEPGAKGKGKIIMATVKGDVHDIGKNIVGVV
LQCNGFEVIDMGVMVPWQDIIKAANENDADMIGLSGLITPSLDEMVTVAAEMQRANMTMP
LLIGGATTSRVHTALRIDPAFTGPVVHVLDASRAVGVATALVSETQKADFVQKTKDDYEH
VRVARANKGQSQLLSLDDARANAFEMDESLKAPRPRLPGTHRFPDWDLKDLVNYIDWTPF
FRAWELAGNYPAILEDEIVGESARSLFADAQKMLQKIIDEKWLTARGVAGLWPCRRQGDD
IIVHVEDEKHYTLPMLRQQIAKREGRANMCLADFISHDGDWMGGFAVSIHGIEPHLARFK
NAIDDYSDILLKALADRLAEAFAERLHHYVRTALWGYAEGEQLTNEALIKEEYRGIRPAP
GYPACPEHSLKPILFEMLDAHHATGATLTESFAMLPTAAVSGFYFGHQQAEYFGVARVGR
DQLEDYAARRGIDLETAERYLRPNLD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaatccaccgccaccttcgtcaacatcggcgagcgcaccaacgtcaccggc
tccgccaagttcaagaagctgatcatggccggcgactatgccgcggcgatcgacatcgcc
cgcgagcaggtcgaaaatggcgcgcagatcgtcgacgtgaacatggacgaaggcctgctc
gacgcggtcgaggcgatgaccaccttcctcaagctcatgacgtcggagccggacatcagc
cgcgtgccggtgatgatcgacagctccaaatgggaagtcatcgaggcggggctgaagtgc
gtctccggcaagccggtggtcaactcgatcagcatgaaggaaggtgaggaggccttcctg
catcacgcccgcctctgcatggcctatggcgcggccgtggtggtcatggccttcgacgag
accggccaggccgacacccaggcccgcaaggtcgagatttgcgagcgcgcctacaagctg
ctgatgacgatcggcttcccgcccgaagacatcatcttcgatcccaatatcttcgctgtc
gccaccgggatcgaggagcataacaactacggcgtcgacttcatcgaagcctgtcgcgag
atcaagcagcgctgcccgcacgttcatatctcgggcggcctgtccaacttctccttctcc
ttccgtggcaacgagccggtgcgccgggcgatgcactcggtcttcctctatcatgccatt
cccgccggcctcgacatggcgatcgtcaatgccgggcagctcgacgtctatgacgcgatc
gacccggcgctgcgccaggcgtgcgaggacgtcctcctcaacagcgatcccgaagccggc
gaccgcctcgtcgcgctcgcggaatccttcaagggcaaggatgccgcatcggaaaaggcc
gcgcaggaatggcgcggctggccggtcgccaagcgcctcgaacatgcgctggtcaagggc
atcgacatgtatgtcgtggaagacaccgaggaatgccgcctcgccgccgaaaagccgatc
caggtgatcgaaggcccgctgatggacggcatgaacgtggtcggcgacctgttcggcgcc
ggcaagatgttcctgccccaggtggtgaagtccgcccgcgtcatgaagaaggcggtggcc
catctgctgccttatatcgaggcagccaaggaacccggcgccaagggcaagggcaagatc
atcatggcgacggtcaagggcgacgtccatgatatcggcaagaatatcgtcggcgtcgtg
ctccagtgcaacggcttcgaggtgatcgacatgggcgtgatggtgccctggcaggacatc
atcaaggccgcgaacgagaatgacgccgacatgatcggcctgtccggcctcatcaccccc
tcgctcgacgagatggtgacggtggcggcggaaatgcagcgcgccaacatgaccatgccg
ctgctgatcggcggcgcgaccacctcgcgcgtccacaccgcgttgcgcatcgacccggcc
ttcaccggcccggtcgtccatgtgctcgacgccagccgcgcggtcggcgtcgccaccgcc
ctggtgtcggaaacgcagaaggccgatttcgtccagaagaccaaggatgattatgagcat
gtccgcgtcgcccgcgcgaacaagggacagagccagctcctgtcgctcgacgacgcccgc
gccaacgccttcgagatggacgagagcctgaaggcaccccgtcccaggctgcccggcacc
caccgcttccccgactgggacttgaaggatctggtcaactatatcgactggacccccttc
ttccgcgcctgggagctggccggcaattatcccgccatcctggaggacgagattgtcggc
gaaagcgcccgcagcctgttcgccgacgcgcagaagatgctccagaagatcatcgacgag
aaatggctgaccgcgcgcggcgtcgcgggcctgtggccctgccgtcgtcagggcgacgac
atcattgtccatgtcgaggacgagaaacattataccctgccgatgctgcgccagcagatc
gccaagcgcgaaggccgggcgaacatgtgccttgccgacttcatcagccatgatggcgac
tggatgggcggctttgccgtgtcgatccacggcatcgagccgcatctggcccgcttcaag
aatgcgatcgacgattattcggatatcctgctcaaggcgctggccgaccgtctggccgaa
gcctttgccgagcggctgcaccattatgtccgcaccgcgctctggggctatgccgagggc
gagcagctgaccaacgaggcgctgatcaaggaagaatatcgcggcatccgcccggcaccc
ggctatccggcctgcccggaacatagtctgaagccgatcctgttcgaaatgctggacgcc
catcatgcgaccggcgcgacgctcaccgaaagcttcgccatgctgccgacggcggcggtc
agcggcttctatttcggccaccagcaggcggaatatttcggcgtcgcccgcgtcggccgc
gaccagctcgaagattatgccgcccgccgcggcatcgacctggaaaccgccgaacgctat
ctgcgcccgaacctggactga
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