Sphingopyxis sp. YF1: EAO27_08525
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Entry
EAO27_08525 CDS
T10727
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
spyf Sphingopyxis sp. YF1
Pathway
spyf01501
beta-Lactam resistance
spyf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spyf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EAO27_08525
01503 Cationic antimicrobial peptide (CAMP) resistance
EAO27_08525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spyf03036
]
EAO27_08525
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyf02000
]
EAO27_08525
01504 Antimicrobial resistance genes [BR:
spyf01504
]
EAO27_08525
Chromosome and associated proteins [BR:
spyf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EAO27_08525
Transporters [BR:
spyf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EAO27_08525
Antimicrobial resistance genes [BR:
spyf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EAO27_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
Phage_AlpA
CzcB_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UNU42742
LinkDB
All DBs
Position
complement(1790351..1791568)
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AA seq
405 aa
AA seq
DB search
MQSYRRSTLRLGAILLFAASLAACSGNDEKDGGRSAPEVGYVVAQPGTVPVAIELGGRTV
AFETSEVRPQVNGIIRRRLFEQGGYVRAGQPLFQIDASLYQAAVEQAAANLASARASAEA
AKVKADRFRPLADMEAIAKQDYTDAAAQARVANAAVAQNAAALETARINLRYATISAPIS
GRIGRSLFTAGALVNANQADPLAVIQRTDPIYVDMQQSSAELTTLRQRLASGGVLPGNTN
VRLLLEDGSAYGFAGTIEFSEAVVNAETGTVTLRARFPNPQGGLLPGMFVKAVFEQAIEP
GVYLVPQAAVQRDFDGSAFVYLVGVDNKAARRKITAERTVGNDWVVTDGLKPGDKVITQG
LGTLRQGQPVRPVAAGTPQRVGAPKGGAAKGGSSGGAGGSSAKGG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttaccggcggtcgacgctccggctcggcgctatcctgttgtttgcggcatcg
ctcgcggcatgttcgggcaatgacgagaaggacggcgggcgctccgcgcccgaggtcggc
tatgtcgtcgcgcagcccgggacggtcccggtcgcgatcgaactgggcggtcgcaccgtc
gcctttgaaaccagcgaggtccgcccgcaggtcaacggcatcatccggcgccggctgttc
gagcagggcggctatgtccgcgccggccagccgctgttccagatcgacgccagcctgtac
caggcggcggtcgagcaggcggcggccaatctggcgagcgcccgcgccagcgccgaggcc
gcgaaggtcaaggccgaccgtttccgcccgctggccgatatggaggcgatcgccaagcaa
gactataccgatgctgcggcgcaggcgcgcgtcgccaacgcggcggtcgcgcaaaacgcc
gccgcgctcgaaaccgcgcggatcaacctgcgctatgcgacgatcagcgcgccgatcagc
gggcggatcggacgcagcctgttcaccgccggggcgctggtcaacgccaatcaggccgac
ccgctggcggtcatccagcgcaccgacccgatctatgtcgacatgcagcagtcgagcgcc
gagctgacgacgctgcgccagcggctggcgagcggcggcgtgctgcccggcaacaccaat
gtccgcctgctgctcgaggatggcagcgcctatggctttgccggcacgattgaattttcc
gaagcggtggtgaacgccgagacggggacggtgacactgcgcgcgcgtttcccgaacccg
cagggtgggctgttgcccggcatgttcgtgaaagcggtgttcgagcaggcgatcgaaccc
ggcgtctatctggtgccgcaggcggcggtgcagcgcgatttcgacgggtcggcgttcgtc
tatctcgtcggggtcgacaacaaggcggcacggcgcaagatcaccgccgagcgtacggtg
gggaacgactgggtcgtcaccgacgggctgaagccgggcgacaaggtgatcacgcagggg
ctgggcacgctgcgccaggggcagccggtgcggcccgtcgcggcgggcaccccgcagcgg
gtgggagcgccgaagggcggtgcggccaagggcggttcaagcggtggcgcgggcggatca
tcggccaagggcggctga
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