Sphingobium sp. YG1: YGS_C1P1829
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Entry
YGS_C1P1829 CDS
T05858
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00220
Arginine biosynthesis
spyg00250
Alanine, aspartate and glutamate metabolism
spyg00430
Taurine and hypotaurine metabolism
spyg00910
Nitrogen metabolism
spyg01100
Metabolic pathways
spyg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
YGS_C1P1829
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
YGS_C1P1829
00220 Arginine biosynthesis
YGS_C1P1829
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
YGS_C1P1829
Enzymes [BR:
spyg01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
YGS_C1P1829
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_HM3
GDH_ACT3
GDH_ACT2
GDH_HM2
GDH_HM1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BBD00574
UniProt:
A0A2Z6AF39
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All DBs
Position
1:1959250..1963929
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AA seq
1559 aa
AA seq
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MTALAEAKNKEVDKNIREALEGALSRGALPGESEGFDEAALAAAAAFLGRTANGRKPGHE
AIAVETLGEGANGRFMRLAIINDDMPFLVDSIANALAAADITIHRLLHPVLFVTRDGDGA
LTGVFEEDASGARRESMIYIETDRADAKARRALEKSLQETLADVRVAVADWPKMQSAMTA
DADAVPDEEGAALLRWFLARHFTQTGHEILHRDGSSSAPLGICTRHDKPLIAPASLEAAF
TWFEEGKRTPLIIKSSRISRVHRLVLLDLIIIPVREGKTVKALSIHAGMWTSSGLSATPD
KVPLLRSALSTLMDKFGFDPQGHAGKTLAHALTALPHDITIGFDRETLERLALTFMSLTD
RPRPKLALATSALARHLYAFVWLPRDELSTARRVSIQDMLALKSHGTVLSWSIALEEGGL
ALLRITLDLRDGGVVPDDIALDRMLKQMVRGWIPAVEEALAVTEEPGRAAAMAQRYGGGF
PLAYRNGAGPEEAAVDIRLIHGLSGDGDKSIRIYRNPEDSVERLRLKLYSHVTVALSEVV
PAFENFGFRVIEEMTTAISGSAIEGGTLGHVQRFVLELPAGDNAQVVVDRAEVVTEAIAQ
VLEGVAENDRLNELIVTAGLAPRSVVLFRALYRYLRQAGVAYGMVTFADTLRKAQGVANN
LITLFEALHDPAAQDGAADRIAQAQSEIDAGLEQVTAIDEDRILRLLRAVITATLRTNFY
APAAQEAIAFKLDSALVPGLPAPLPWREIWVYSPRVEGIHLRAGPVARGGLRWSDRRDDF
RTEILGLMKAQRVKNAVIVPTGAKGGFYPKQLPNPQADRDAWIAEGTESYRIFIRSLLSI
TDNIVKNKVTHPADVVVHDGDDPYFVVAADKGTATFSDVANAIALDRGFWLGDAFASGGS
NGYDHKAMGITARGAWISVQRHFAEMGVDVQSEPVSVVGCGDMSGDVFGNGMLLSKAIKL
VAAFDHRHIFFDPTPDPAKSWEERNRMFALPRSSWEDYDKSLISKGGGVFSRALKRIPLT
PEMQAILDVKDKEMEPAALISAILKAPADLLWFGGIGTYVKAAAQSHGDVGDPANDRLRV
NAEQLRVKVIGEGANLGTTQAGRIAFSLHGGRINTDFIDNSAGVDCSDNEVNIKIALNKE
MVEGRLPFDKRNTLLESMTDAVGDIVLEDNRLQALGLSIAEAGGAADLASYVRLIETFEE
TGRLDRQVEGLAANDQLLRRGQDGQGLTRPELAVLLSTAKLALQDAIEHGDLATDESMTA
ELMAAFPEAMQKKEADAIAGHALKKEIIATKVANRIVNRLGLIHPFELAEEEGCSLADLA
SAFLIAERLYDIGTLWADIDAADMSEGARLALFSDIASGMRAQIADILRALPAGTLPAEG
HKRLATGVGLLAHQVDDLLTSEAQRRTAAVTDRLIGLGAPETLAVRTAGLFKLDGAVGIA
SLAARLGVEEIALTRAFTHLGEAVGIDWVQSAAARMEPTDPWERLLISGVARDMQQVRLD
FLAQGKGTDVATHVEEWLQAKGARVRQFRTLVQRAKAAATPNVAMLAEIAGQARGLLGR
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgctggcggaagcgaagaacaaggaagtcgacaagaatattcgcgaggcgctg
gaaggcgcgctcagccggggtgccctgcccggcgaaagcgaagggtttgacgaggccgcg
ctggctgccgccgccgcattcctgggccgcaccgccaatggccgcaagcccggccatgag
gcgattgcggtggaaacgctgggcgaaggcgccaatggccgcttcatgcggctggccatc
atcaatgatgacatgcccttcctggtcgattccatcgccaatgcgctggcggcggccgac
atcaccatccaccgcctgctccaccccgtcctgttcgtgacgcgtgatggcgatggcgcg
ctgaccggcgtgttcgaagaggatgcgtccggcgcccgccgcgaatccatgatctatatc
gaaaccgaccgcgccgacgcgaaagcgcgccgcgcgctcgaaaaatccttgcaggaaacg
ctggccgacgtgcgcgtcgcggtcgccgactggcccaagatgcagtcggccatgaccgcc
gatgccgacgccgtgccggatgaggaaggcgccgccttgctgcgctggttcctggcccgc
cacttcacccagacgggccatgaaatcctgcaccgcgacggcagcagcagcgcgccgctc
ggcatctgcacccgccatgacaagccgctgatcgcgcccgcctcgctggaggccgccttc
acctggttcgaagagggcaagcgcaccccgctgatcatcaagtccagccggatttcgcgc
gtccatcgcctggtactgctcgacctcatcatcattcccgtgcgggaaggaaagacggtc
aaggccctgtcgatccatgccggcatgtggaccagttcgggcctgtcggcgaccccggac
aaggtgccgctgctgcgttcggccctgtccacgctgatggacaagttcggcttcgatccg
cagggtcacgccggcaagacgctggcccatgcgctgaccgccctgccccatgacatcacg
atcggcttcgaccgcgagacgttggagcggctggcgctgaccttcatgtcgctgacggat
cggccgcgccccaagctggcgctcgccaccagcgcactggcgcgtcacctctatgccttc
gtctggctgccgcgcgatgagctgtccaccgcccgccgcgtgagcattcaggacatgctg
gcgctcaagagccatggcaccgtgctcagctggtcgatcgcgctggaggaaggcggcctg
gcgctgctgcgcatcacgctcgacctgcgcgatggcggggtcgtgcccgatgacatcgcg
ctggaccggatgctcaagcagatggtgcgtggctggattccggcggtcgaagaggcgctg
gccgtcaccgaagaaccgggccgcgccgccgccatggcgcagcgctatggcggcggcttc
ccgctcgcctatcgcaacggcgctggtccggaagaagccgccgtcgacatccgcctgatc
catggcctgtcgggggatggcgacaagtcgatccgcatctaccgcaacccggaagacagc
gtcgaacggctgcggctgaaactctatagccatgtcaccgtcgccctgtccgaagtcgtc
cccgccttcgagaatttcggtttccgcgtgatcgaggaaatgaccaccgcgatcagcggt
agcgcgatcgagggcggcacgctgggccatgtccagcgcttcgtgctggaattgccggcc
ggcgataatgcgcaggtcgtggtcgatcgtgccgaggtcgtgaccgaagccatcgcccag
gtgctggaaggcgtggcggaaaatgaccggctgaacgagctgatcgtcaccgctggcctt
gcgccgcgatcggtcgtgctgttccgcgccctctatcgctatctgcgtcaggcgggcgtc
gcctatggcatggtgaccttcgccgacacgctgcgcaaggcgcagggcgtcgccaacaac
ctcatcaccctgttcgaagcgctgcatgatcccgccgcgcaggatggcgctgccgaccgt
atcgcgcaggcgcaatccgaaatcgacgcggggctggaacaggtgacggcgatcgacgag
gatcgcatcctgcgcctgctgcgcgccgtcatcaccgcgacgctgcgcaccaatttctac
gcccccgccgcgcaggaggcgatcgccttcaaactggacagcgccttggtgccgggtctg
cccgcgccgctgccctggcgcgaaatctgggtctattccccgcgtgtcgagggcatccac
ctgcgcgccggcccggtcgcccgtggcggcctgcgctggtcggatcgtcgcgacgatttc
cgtaccgagatcctcggcctcatgaaagcgcagcgcgtgaagaacgccgtcatcgtgccg
accggcgcgaagggcggcttctatcccaagcaactgcccaacccgcaggccgatcgcgac
gcctggatcgccgaaggcaccgaaagctatcgcatcttcatccgatccttgctgtcgatc
accgacaatatcgtgaagaataaggtgacgcatccggccgatgtcgtcgtgcatgatggc
gacgatccttatttcgtcgtcgcggcggacaagggcacggcgaccttctccgacgtcgcc
aacgccatcgcgctggatcgcggcttctggctgggcgatgccttcgccagcggcggctcc
aacggctatgaccacaaggcgatgggcatcacggcgcggggcgcatggatttcggtccag
cgccacttcgccgaaatgggcgtcgatgtgcagagcgagccggtcagcgtcgtgggctgc
ggcgatatgtcgggtgacgtgttcggcaacggcatgctgctcagcaaggcgatcaagctg
gtcgccgccttcgaccatcgccacatcttcttcgaccccacgcccgatccggccaagagc
tgggaagaacgtaaccgcatgttcgccctgccccgctccagctgggaagattatgacaag
tcgctcatttccaagggcggtggcgtcttctcccgcgcgctgaagcgcatcccgctgacg
cccgaaatgcaggcgatcctggacgtgaaggacaaggagatggagccggccgcgctcatt
tccgcgatcctcaaggccccggccgacctgctctggttcggcggcatcggcacctatgtg
aaggccgccgcgcagagccatggcgacgtgggcgatccggccaatgatcgcctgcgcgtc
aatgccgaacagctgcgcgtcaaggtgatcggcgaaggcgcgaacctgggcaccacccag
gcgggccgtatcgccttctcgctgcatggcgggcggatcaacaccgacttcatcgacaac
agcgccggcgtcgactgttccgataatgaagtgaacatcaagatcgcgctgaacaaggaa
atggtggaaggccgcctgcccttcgacaagcgcaacacgctgctggaaagcatgaccgac
gcggtgggcgacatcgtgctggaggataaccggcttcaggcgctcggcctctccatcgcc
gaagcgggcggcgcggccgacctcgcctcctatgtccgcctgatcgaaacgttcgaggaa
accggcaggctcgaccggcaggtggaggggctggccgccaacgaccagctgctgcgccgt
ggacaggatggtcagggcctcacccgccccgaactggccgtgctgctctcgaccgccaag
ctcgccctgcaggatgctatcgaacatggcgatcttgccacggacgagagcatgacggcc
gaactgatggccgccttccccgaagcgatgcagaagaaggaagcggacgcgatcgccggc
catgcgctcaagaaggagatcatcgccaccaaggtcgccaaccgcatcgtcaatcgtctg
ggcctcatccacccgttcgaactggcggaggaggaaggctgctcgctcgccgatctggcc
agcgccttcctgatcgcggaacgcctctacgatatcggcacgctctgggcggatatcgac
gcggcggacatgtcggaaggcgcacgccttgccctgttcagcgacattgccagcggcatg
cgggcgcagatcgccgacatattgcgcgccctgcctgccggcacgctgccggccgagggg
cataagcgtctggccacgggcgtcggcctgctggcccatcaggtcgacgatctgctgacc
agcgaggcgcagcgccgcaccgctgccgtcaccgaccggctgatcggccttggcgctccc
gaaacgctggcggtccgcaccgccgggctgttcaagctggacggcgccgtcggcatcgcc
tcgctcgcggcgcggctgggcgtggaggaaatcgcgctgacccgcgccttcacccatctg
ggcgaagcggtcggcatcgattgggtccaatccgccgccgcgcgcatggaaccgaccgat
ccgtgggagcgcctgctcatctccggcgttgcccgcgacatgcagcaagtccggctcgat
ttcctggcgcagggcaagggcacggacgtcgccacccatgtcgaagagtggttgcaggcc
aagggcgcccgcgtccgccagttccgcaccctggtccagcgcgccaaggccgccgcgacc
cccaatgtcgcgatgttggccgaaatcgccggccaggcgcgcggtctgctgggccgctga
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