Streptococcus pyogenes HSC5 (serotype M14): L897_03045
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Entry
L897_03045 CDS
T02743
Name
(GenBank) DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
spyh
Streptococcus pyogenes HSC5 (serotype M14)
Pathway
spyh03030
DNA replication
spyh03410
Base excision repair
spyh03420
Nucleotide excision repair
spyh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L897_03045
03410 Base excision repair
L897_03045
03420 Nucleotide excision repair
L897_03045
03430 Mismatch repair
L897_03045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyh03032
]
L897_03045
03400 DNA repair and recombination proteins [BR:
spyh03400
]
L897_03045
Enzymes [BR:
spyh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
L897_03045
DNA replication proteins [BR:
spyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L897_03045
DNA repair and recombination proteins [BR:
spyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
L897_03045
NER (nucleotide excision repair)
GGR (global genome repair) factors
L897_03045
MMR (mismatch excision repair)
DNA ligase
L897_03045
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L897_03045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_3
NuA4
Motif
Other DBs
NCBI-ProteinID:
AGQ27398
LinkDB
All DBs
Position
572732..574690
Genome browser
AA seq
652 aa
AA seq
DB search
MKKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYVLQDSPTQQVG
GTILKGFEKYRHQYPLFSLQDAFSREELDAFDKRVKAEFPNATYLAELKIDGLSISLSYE
NGFLQVGATRGDGNIGENITENIKKIKDIPHQLSEPLTITVRGEAYMSRQSFKAINEARQ
ENGETEFANPRNAAAGTLRQLDTSVVAKRQLATFLYQEASPTARNQQNEVLAELADLGFS
VNPYYQLTSSMDEIWDFIKTIEAKRDQLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVIVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEDEVALRCINPLCPS
LIQRSLEHFASRDAMNITGLGPAIVEKLFLAGFVHDVADIYQLTKEDFMQLDGIKEKSAD
KLLAAIEASKSNSAEKLLFGLGIRHIGSKVSRLILEVYGDISALLTAKEEEIARIDGLGS
TIAQSLTQYFEQKTAAILVDELKTAGVNMHYSGQKVNSDAALFGLTVVLTGKLNQLNRNE
AKDKLEALGAKVTGSVSKKTDLVIAGSDAGSKLEKAKSLGIRIEDEDWLRQL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcataaaagaattaacagatcttcttaaccgttaccgttatgactattat
actaaagatgccccatcagtttctgacagtgactatgataagctttatcgtgaactggtg
actttagagcagtcatatcccgagtatgtcttgcaagatagcccaacgcagcaggttgga
gggactattttaaaggggtttgaaaaatatcgacatcagtatccgctttttagtttgcag
gatgctttttcacgtgaggagctggatgcttttgataagcgcgtcaaggccgaatttccg
aatgccacctatctagcagagttaaaaattgatggtttatctatttccttgagttatgag
aatggcttcttacaggttggagcaacacggggtgatggcaatatcggtgaaaatatcaca
gaaaatatcaaaaaaataaaggatattcctcaccaattgagtgagcctttaaccatcacc
gttcgaggagaggcttacatgtctcgtcagtcctttaaagcgatcaatgaagcacgccaa
gaaaatggggagactgaatttgctaatcctagaaatgctgccgctgggacactaaggcag
ctagatacgtcagtggttgctaagcgtcaactagccacttttttgtatcaagaagctagt
ccgacagctagaaatcaacaaaatgaggtcttagcagaattagcagatctaggtttttca
gtaaatccgtattatcaactcacatcgtctatggatgagatttgggattttatcaaaact
attgaggcaaaaagagatcaattagcttatgacatagatggcgttgttattaaagttaat
agcctagccatgcaagaagagctagggtttacggttaaagctccacgctgggccattgct
tacaaatttccagcagaagaaaaagaggcagaaatcctttcggttgactggacagtggga
cgaacaggcgtggtcacacctacagcgaatctaactcctgtgcaactagcggggacaacc
gtgagtcgtgcaaccctacataatgtggattatattgccgaaaaagatatccgtattggc
gatacagtgattgtatataaggcaggggacattattcctgctgtcttaaatgtcgttatg
agtaagcggaaccagcaagaagtaatgcttattcctaaactatgcccatcttgtggtagt
gaattagttcattttgaagatgaggttgctttgcgttgtattaatccgttgtgtcctagt
ttgattcagcgaagtttggagcattttgcaagtcgtgatgccatgaacattactgggctg
ggaccagctattgtggaaaaactatttttagcggggtttgttcatgatgttgctgatatt
taccagttgaccaaagaagatttcatgcaattagatggcatcaaagaaaagtcagctgat
aaattgctcgctgcgattgaggcttctaaatcaaattcagctgaaaaactgttatttggt
ctaggaattcgtcatattggctctaaggttagtcgcttaattttagaggtatacggagat
atttctgctcttttaaccgctaaagaagaggaaatcgcaaggatagatggtcttggctca
acgattgctcaatcacttactcaatactttgaacaaaaaacggctgcgattttagtagac
gagttaaagacagcaggtgtcaacatgcattactcaggtcaaaaagttaatagtgacgca
gcgctttttggtctaactgttgttttaactggcaaattaaatcagctgaaccgaaatgag
gccaaagataaattagaggcattaggtgccaaagttactggaagtgtatctaagaaaaca
gatttagttattgcaggtagtgacgctggttctaagctagaaaaagcaaagagcttagga
attcggattgaagatgaagattggctacgccagctttaa
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