Stakelama tenebrarum: G5C33_03230
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Entry
G5C33_03230 CDS
T06464
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
spzr
Stakelama tenebrarum
Pathway
spzr01501
beta-Lactam resistance
spzr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5C33_03230
01503 Cationic antimicrobial peptide (CAMP) resistance
G5C33_03230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spzr02000
]
G5C33_03230
01504 Antimicrobial resistance genes [BR:
spzr01504
]
G5C33_03230
Transporters [BR:
spzr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G5C33_03230
Antimicrobial resistance genes [BR:
spzr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5C33_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
QIG78896
UniProt:
A0A6G6Y2V0
LinkDB
All DBs
Position
complement(643376..646516)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSFRNISAWSIRNPVPPIVLFIALTLAGIVSFMTMEVNNEPDIEFPIVWVNISQPGAAPS
ELETQITQRVESAVRSLQGIDQIDSTITEGNSQTIVQLDIGTPIDRAVNDVREAVSQIRG
ELPDGILEPRVGRANTSDNDIASFTAIATDMTMEELSWYVDNSVAKELLSVEGMSTVDRI
GGVDREIRVILDPAKLQALGITASQVNGQLRQTNLNAAGGRTEISGTEQSVRVLGNADTA
ITLGATQISVGGGRTVKLSDIAEVRDSYAEVRSLAEWNGRPVLAFDIKRAKGASDVAVFH
GAMEKLKTLEERNPKVRFEILFNSVEYTEEQYHSAIDALVEGAVLAVIVVFLFLRDWRAT
IISALAIPLSAIPTFWFMDMLGFTLNQMTLLALSLVAGVLVDDAIVEIENIVRHMRMGKS
AYQASIDAADEIGVAVLATTMSIVAVFLPVGMMPGVSGQFFKNFGLTVVAAVLMSLAVAR
MLTPMIAAYFLKAKGHATHGEGFLMDQYMKVLRWTLRHRWSAVVGGAVAMALTVWCFATI
PQTFQPPQNRDSTSASIEMVPGTTLEQTEAVVDRVDALLRAQPQVENTYARTYVGNGRVV
ALLKDDRDLTSTQFERGLAPELNKIPDARVSFNSSMSWGGSGRDITITLGGEDPELLEQT
GIKLVREMAGLDTLVAPRITGDLQRPEIVIKPRLDLAANLGVTTAALSGAIRIATLGEID
QNAAKFSLSDRQIPIRVALSENSRERLSTIQNLPVPTQTGGTVPLSVVADIDFGMGPTRI
QRINQQRRLVIGADLAPDIVSGVAMEQIHELPTMQNLPVGVNELVTGSAKWQAEMITNFI
IAVISGVFLVFAVLVLLYRRFVSPLVNMGSLMLAPLGGLLALKITGDPISLPVYIGILML
LGIVAKNSILLIDFALEEMEKGVDKVTAIIDAGHKRAQPIVMTTVAMVAGMVPTALSLSG
DSSFRTPMGITVIGGLILSTVLTLLIVPASFSLVLGLEKWAGPRLSRRLLTYRPGDEGPK
AIDHQPGGRIGYHPGHPGGDEPHPAE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccgcaacatctcggcatggtcgatccgcaatccggtgccgccgatcgtgctg
ttcatcgcgctgacgctcgcgggaatcgtgagcttcatgacgatggaggtgaataacgag
cccgacatcgaattcccgatcgtctgggtgaacatcagccagcccggcgccgcgccaagc
gaactggaaacccagatcactcagcgcgtcgaatcggcggtgcgcagcctgcagggcatc
gaccagatcgattcgacgattaccgaaggcaattcgcagacaatcgtccagctcgacatc
ggcacgccgatcgaccgcgccgtcaacgacgtgcgcgaagcggtgtcgcagatccgcggt
gagctgcccgacggcattctcgagccgcgcgtcggccgcgccaacaccagcgacaacgat
atcgccagcttcaccgccatcgccaccgacatgacgatggaagagctgagctggtatgtc
gacaacagcgtcgccaaggaactgttgtcggtcgagggcatgtcgacggtcgaccggatc
ggcggcgtcgaccgcgaaatccgcgtcatcctcgaccccgccaagctgcaggcactcggc
atcaccgccagccaggtgaacggccagcttcgccagaccaatctgaacgccgcaggcgga
cgcaccgaaatttcgggcaccgaacagtcggtgcgcgtgctcggcaacgccgacaccgcg
atcaccctgggcgccacgcagatatcggtcggcggcggccgcaccgtgaagctgagcgac
atcgccgaagtccgcgacagctatgccgaagtgcgcagcctcgccgaatggaacggtcgc
cccgtgctcgccttcgacatcaagcgcgccaagggcgcatctgacgtggcggtattccac
ggtgcgatggaaaagctgaagacgctcgaggaacgcaatcccaaggtgcggttcgaaatc
ctgttcaacagcgtcgaatataccgaggaacaatatcacagtgcgatcgacgcgctggtt
gaaggcgcggtgctcgccgtgatcgtcgtcttcctgttcctgcgcgactggcgcgcgacg
atcatttccgcgctcgccatcccgctgtcggcgatcccgaccttctggttcatggacatg
ctgggcttcacgctcaaccagatgacgctgctcgcgctcagcctggtcgcgggcgtgctg
gtcgacgatgcgatcgtggaaatcgagaatatcgtgcgccacatgcggatgggcaaatcg
gcctatcaggcatcgatcgacgccgccgacgaaatcggagtggcggtgctcgccaccacc
atgtcgatcgtcgcggtgttcctgccggtcggcatgatgccgggcgtttcgggccagttc
ttcaagaatttcgggctgacggtggtcgccgcggtgctgatgtcgctggcggtggcgcgc
atgctgacgccgatgatcgcggcctatttcctgaaggccaagggccatgccacgcacggc
gagggcttcttgatggaccagtatatgaaggtgctgcgctggacgctgcggcaccgctgg
tcggcggtggtcggcggcgcggttgcgatggcactgacggtctggtgcttcgcgacgatc
ccgcagacgttccagccgccgcagaatcgcgattcgaccagcgcctcgatcgaaatggtg
cccggcacgactctcgaacagaccgaagcggtggtcgatcgcgtcgacgcgctgctgcgc
gcgcagccgcaggtcgagaatacctatgcccggacctatgtcggcaacggacgcgtcgtc
gcgctgctgaaggacgatcgcgaccttaccagcacgcagttcgagcgcgggctggcgccc
gaactcaacaaaatccccgatgcccgcgtcagcttcaattcgagcatgagctggggcggc
agcggccgcgacatcaccatcacgctgggcggcgaggaccccgaactgctcgagcagacc
gggatcaagctggtccgcgaaatggcgggtctcgacacgctggtcgcaccgcgcatcacc
ggcgacctgcagcgccccgaaatcgtcatcaagccgcggcttgatctcgccgccaatctc
ggcgtcacgaccgccgcgctttcgggcgcgatccgcatcgcgacgctgggcgagatcgat
cagaatgccgcgaaattctcgctttccgaccgccagattccgatccgggtcgcgctgtcg
gaaaattcgcgcgagcgcctttcgacaatccagaacctgccggttccgacgcaaaccggc
ggcaccgtgccgctgagcgtcgtcgccgacatcgatttcggcatggggccgacgcgcatc
cagcgcatcaatcagcagcggcggctggtgatcggcgccgatctggctcccgatatcgtc
agcggcgtcgcgatggagcagatccacgaactgccgacgatgcagaacctgcccgtcggc
gtgaacgaactcgtcaccggctcggcgaaatggcaggccgagatgatcaccaatttcatc
atcgccgtcatttccggcgtgttcctggtcttcgccgtgctggtgctgctttatcgccgc
ttcgtgtcgccgctggtcaatatgggatcgctgatgctggcgccgctcggcggcctgctt
gcgctcaagatcaccggcgacccgatctcgctaccggtctatatcggcatattgatgctg
ctcggcatcgtcgcgaagaactcgatcctgctgatcgacttcgcgctcgaggaaatggag
aagggcgtcgacaaggttacggcgatcatcgacgccgggcacaagcgcgcccagccgatc
gtgatgaccaccgtcgcgatggtcgcgggcatggtgccgacggcgctgtcgctgtcgggc
gactcctcgttccgcacgccgatgggcatcaccgtgatcggcggcctcattctgtcgacg
gtgctgacgctgctgatcgtcccggcgagcttcagcctggtgctgggtctcgaaaaatgg
gccggtccgcgcctgtcgcgacgcctgctcacctatcgcccgggcgacgagggccccaag
gcgatcgatcaccagccgggcgggcgtatcggctaccaccccggccatccgggcggcgac
gagccgcacccggcggagtga
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