Sphingomonas qomolangmaensis: NMP03_13810
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Entry
NMP03_13810 CDS
T08594
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo01501
beta-Lactam resistance
sqo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NMP03_13810
01503 Cationic antimicrobial peptide (CAMP) resistance
NMP03_13810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sqo03036
]
NMP03_13810
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sqo02000
]
NMP03_13810
01504 Antimicrobial resistance genes [BR:
sqo01504
]
NMP03_13810
Chromosome and associated proteins [BR:
sqo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NMP03_13810
Transporters [BR:
sqo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NMP03_13810
Antimicrobial resistance genes [BR:
sqo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NMP03_13810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
HlyE
Motif
Other DBs
NCBI-ProteinID:
UUL82242
LinkDB
All DBs
Position
complement(2887353..2888546)
Genome browser
AA seq
397 aa
AA seq
DB search
MHRKIACLAPVLCLLAACGGGGDDEASAKAKGKGGTPEVGVVTLQAEQVPLTTELAGRAA
AFETSDVRPQVSGVIKARLFTEGSIVRQGQTLYQVDPSIYRAAVAEAEANLANAQANLTA
QSARADRFRPLAEIEAVSKQEYTDAQAAARQAAASVQQQRALLETARINLRFTNVPAPIT
GRIGRSIATTGALVTANQAEALTMIQRLDPIFIDIQQSSADLLALRRALATDNTIPSTAE
VRLRLEDGSDYGQVGTLQFAEAMVDPETGAVTLRARFPNPQGLLLPGMYVRARFSQATAR
RAILVPQAGISRDPRGNATVLIVGPDNKAVRRNVRAEQTVGDKWLVTGGVRAGDRVIVEG
LARAQPGQTVRPVPAGSAPRQRPATQGGAQGATKAGN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcgtaaaatcgcgtgcctcgccccggtactttgcctgctcgccgcctgcggcggg
ggcggtgacgacgaagcgtccgccaaggcaaagggcaagggcggcacccccgaggtcggc
gtggtcacgctccaggccgaacaggtgccgttgaccaccgaactcgcgggccgcgccgcg
gcgttcgagacgtccgatgtccggccgcaggtgtcgggggtcatcaaggcgcgattgttc
accgaaggcagcatcgtccgccaggggcagacgctgtatcaggtcgaccccagcatctat
cgcgccgcggtggccgaggccgaggcgaaccttgccaacgcgcaggccaatctgaccgcg
caatcggcgcgcgccgaccgctttcgcccgctcgccgagatcgaggcggtgtcgaagcag
gaatataccgatgcacaggcggcggcgcgccaggcggcggcgtcggtccagcagcagcgc
gccttgctcgaaaccgcgcggatcaacctgcgcttcaccaatgtgcccgcgccgatcacc
ggccggatcggccgtagcatcgccaccaccggcgcgctggtgaccgccaaccaggccgag
gcgctgacgatgatccagcggctcgatccgatcttcatcgatatccagcaatcgagcgcc
gacctgctggcgctgcgccgcgcgctggcgaccgacaacaccatcccgtcgaccgccgaa
gtgcggctgcggctcgaggacggcagcgattacggtcaggtcggcacgctgcagttcgcc
gaggcgatggtcgatcccgagacgggcgcggtgacgttgcgcgcgcgcttccccaatccg
caaggactgctgctgccgggcatgtacgtccgcgcgcgcttcagccaggcgaccgcgcgg
cgcgcgatcctggtgccgcaggcgggcatctcgcgcgacccgcgtggcaatgcgacggtg
ctgatcgtcggccccgacaacaaggcggtgcgccgcaacgtgcgtgccgaacagacggtg
ggcgacaaatggctggtcaccggcggcgtccgcgcgggcgaccgggtgatcgtcgagggg
ctggcgcgcgcacagccggggcagacggttcgcccggtgcccgcaggttcggcgccgcgg
cagcggccggcgacgcagggcggagcgcagggcgcaaccaaggccgggaactga
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