Serratia quinivorans: E4343_10810
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Entry
E4343_10810 CDS
T05941
Symbol
sdeX
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit SdeX
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
squ
Serratia quinivorans
Pathway
squ01501
beta-Lactam resistance
squ01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E4343_10810 (sdeX)
01503 Cationic antimicrobial peptide (CAMP) resistance
E4343_10810 (sdeX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
squ03036
]
E4343_10810 (sdeX)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
squ02000
]
E4343_10810 (sdeX)
01504 Antimicrobial resistance genes [BR:
squ01504
]
E4343_10810 (sdeX)
Chromosome and associated proteins [BR:
squ03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E4343_10810 (sdeX)
Transporters [BR:
squ02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E4343_10810 (sdeX)
Antimicrobial resistance genes [BR:
squ01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E4343_10810 (sdeX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
BSH_CusB
Beta-barrel_RND_2
HH_AAEA_pHBA
HH_CzcB
HH_EMRA
BSH_YhbJ
BSH_CzcB
tRNA_anti-codon
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QBX66643
LinkDB
All DBs
Position
2311852..2313039
Genome browser
AA seq
395 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGSLMLTGCNDKETQQQGAQPPAPEVGVVTLKAEPLNMTTDLPG
RTAAYRIAEVRPQVSGIILKRNFVEGSDIKAGTSLYQIDPATYQASYDSAKGDLAKAQAS
ASIARVTVNRYKPLLGTSYISKQDYDTAVSNLQQADAAVIAAKAAVETARINLAYTKVTS
PISGRIGKSSVTEGALVSNGQTTALSTVQQLDPIYVDVTQSSNDFLRLKQELASGALKQE
NGKAKVKLLLENGAQYAQEGTLEFSDVTVDETTGSITIRALFPNPNDTLLPGMFVRARLD
EGVRSDALLVPQQGVTRNPRGEATAMVVGADDKVEMRTLKADQAIGDKWLVTDGLKAGDR
VIVTGLMKVRPGAQVKVQEVDTQAQKQPQSEAQKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggttaacgcctctggcggcagttctgatgctttcaggcagctta
atgcttacaggatgtaacgataaagaaacccaacagcaaggcgcccaaccaccggctccc
gaagtgggtgtagtgactttgaaggccgagcctctcaatatgactaccgatcttcctggc
cgcaccgctgcgtatcgtatcgccgaagttcgccctcaggtcagcggtattatcctgaaa
cgcaactttgttgaaggcagtgatatcaaggcaggcacttccctgtatcagattgatcct
gctacctatcaggcaagctatgacagcgccaaaggcgatctggccaaagcacaggccagc
gcttctatcgcgcgcgtgacggtcaaccgctacaagcccttgctgggcaccagctacatc
agcaagcaggattacgatactgccgtttccaacctgcagcaggcagatgccgctgtgata
gccgcaaaagcggcggttgaaactgcgcgtatcaacctggcttacactaaagtgacgtcc
ccaatctccgggcgtatcggcaaatcttcagtaaccgaaggcgcgctggtcagcaacggt
caaaccacggcgctgtctaccgtgcaacagttggatccgatttacgtcgacgtcactcag
tcgagcaacgacttcctgcgcctgaagcaagaattggccagcggtgcgctgaaacaggaa
aacggcaaggccaaggtgaaactgctgctggagaacggcgcgcagtacgctcaggaaggc
acgctggaattctctgacgtcaccgtggatgaaaccaccggttcaatcaccattcgcgcc
ctgttccctaacccgaacgatacgctgctgccaggtatgttcgttcgcgcccgtctggac
gaaggcgtgcgcagcgatgcattgctggtgccacagcagggtgtaacgcgtaacccgcgt
ggcgaagctaccgcgatggtggtgggcgctgacgataaagtcgaaatgcgcacgctgaaa
gcggaccaggcgattggtgacaaatggttggttaccgacggcttgaaagccggcgaccgt
gtaattgtcactggcctgatgaaagtccgcccaggcgctcaggtaaaagtgcaggaagtt
gacactcaggcgcaaaagcagccgcagtctgaagcgcagaagtcataa
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