Sphingomonas radiodurans: LLW23_02370
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Entry
LLW23_02370 CDS
T08717
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srad
Sphingomonas radiodurans
Pathway
srad01501
beta-Lactam resistance
srad01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LLW23_02370
01503 Cationic antimicrobial peptide (CAMP) resistance
LLW23_02370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srad02000
]
LLW23_02370
01504 Antimicrobial resistance genes [BR:
srad01504
]
LLW23_02370
Transporters [BR:
srad02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LLW23_02370
Antimicrobial resistance genes [BR:
srad01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LLW23_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WBH16986
LinkDB
All DBs
Position
complement(500530..503709)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSRYFIDRPIFAWVIAIVLMLGGAIAIRSLPVAQFPEIAPPAVSISAIYPGADAETLERT
TTQIIEQQLRGIDNLRYFSANSSSSGNLTITLTFEQGTDPDIAQVQVQNKLQAATPLLPQ
EVQQQGLQVQKSAASFLVVVGLYSQDGSHSGTDLADMVVSRLQDPISRVTGVGELQVFGS
QYAMRLWVDPLKLNSYQLTIADVTAAVQAQNAQVSAGQIGAQPAPAEQMLNATVSVQSRL
QTAEQFGAIRLKTSQEGAVVRLSDVARVELGAENYGFDAKFNGKPAAGFGVRLAAGANAL
DTVEAVKARTQELARGFPADVKVVYPYDTTPFVRLSVEQVVETLIEAVVLVFLVMFLFLQ
NWRATIIPTIAVPVVLLGTFAVMALAGYSINTLTLFGMVLAIGLLVDDAIVVVENVERLI
VDEGLSPKAAARKSMDEISGALIGIGLVLSAVFLPMAFFGGSTGVIYRQFSITIVSAMVL
SVLVALILTPALCATILKPHDPNKHQGNGIFARFFRWFNRTFERGTAKYERGVKRTARSW
KRSLLVYALIVAGMVFMFMRLPGAFLPEEDQGTVIALVQGPAGSTTARTEKGLALVRSQF
LGESAVKSVFTINGFSFAGQGQNAGLAFISLKPWEDRPGADNRAQAVAGRAMGAFSQFKD
GMIFALVPPAVQELGNATGFDVQLVDTGGIGHARLTQTRNMLLGAAAQDPRVAQVRPLSL
EDAPQLKIVVDQDKARALGLDLGQVNATISTAWGGSYVNDFIDRGRVKRVYIQADQAFRL
KPEDLASFYVRGADGQMVPFTSFSTIEWANAPVQLTRYNGQPAMQLQGAAGQGLSTGGAM
TAIEEMHAKLPPGTQLEWTGLSFEERLSGGQAPALYALSLLIVFLCLAALYESWSVPISV
LLVVPLGVVGALLAATLTGLNNDIYLQVGLITTIGVSAKNAILIVEFAQERIAEGMRPFQ
AAVEAAKLRLRPILMTSLAFIFGVLPLAVSTGAGAGGQNAIGRAVVGGMLSATVLAIFLV
PMFFVVITRLFNRGKRDDEADDVRDDGRDRDGDRAPQGA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctatttcatcgatcggcccatcttcgcatgggtcatcgcgatcgtcctgatg
ctgggtggcgcgatcgcgatccgctcgctcccggtcgcccagttccccgagattgcgccg
cccgcggtgtcgatcagcgcgatctatcccggcgccgatgcggaaacgctcgagcgcacg
acgactcagatcatcgagcagcagctacgcggcatcgacaatctgcgctatttttcggcc
aactcgtcttcgtcaggcaatctcacgatcacgctgacgttcgagcagggcaccgatccg
gacatcgcgcaggtccaggtgcagaacaagctgcaggcagcgaccccgctgctgccgcag
gaagtgcagcagcaggggcttcaggtgcagaagtcggcggccagcttcctggtggtcgtc
gggctgtattcgcaggacgggtcgcacagcggcaccgatctggcggacatggtggtctcg
cgcttgcaggatccgatcagccgggtgaccggcgtcggcgagcttcaggtgttcggctca
caatatgcgatgcggctgtgggtcgatccgctgaagctcaacagctaccagctgacgatc
gccgacgtgacggcagcggtgcaggcgcagaacgcgcaggtttccgcgggccagatcggc
gcgcaaccagcgccggcggagcagatgctcaacgccaccgtgtcggtgcagtcgcgcttg
caaaccgccgagcagttcggcgcgatccgcctcaagacttcgcaggaaggcgcggtcgtc
cgcttatcggacgtcgcgcgggtcgaactcggcgccgagaattacggcttcgatgcgaag
ttcaacggcaagcccgctgccggcttcggtgtgcggctcgctgccggcgcgaacgcgctc
gacacggtcgaggcggtgaaggcgcgcacgcaggagctggcgcggggcttcccggccgac
gtgaaggtcgtctacccgtacgataccacgccgttcgttcgcctgtcggtcgagcaggtc
gtcgagacgctgatcgaggcggtcgtgctcgtcttccttgtgatgttcctgttcctgcag
aactggcgcgcgacgatcatccccacgatcgcggtgccggtggtgctgctcggtacattc
gcggtgatggcgctcgctggctattcgatcaacacgctaacgctgttcggcatggtgctc
gcgatcggcctgttggtggacgatgcgattgtggtcgtcgagaatgtcgagcggctgatc
gtcgacgaggggctttccccgaaagccgccgcgcgcaaatcgatggacgagatctcgggc
gcgctgatcggcattgggctggtgctgtcggctgttttcctgccgatggcgttcttcggc
ggatcgaccggcgtgatctatcgtcagttctcgatcacgatcgtctccgcgatggtgctg
tcggtgctggtcgcgctgatcctgacgccggcgctgtgcgcgacgatcctgaagccgcac
gatccgaacaagcatcagggcaacggcattttcgcgcgcttcttccgctggttcaatcgc
accttcgagcgcggtacggcgaagtacgagcgcggcgtgaagcggacggcgcgcagttgg
aagcgctcgctgctcgtctatgcgctgatcgttgccggcatggtcttcatgttcatgcgg
ctgcccggcgctttcttgccggaggaagatcagggaactgttatcgcgctggtccaaggc
ccggcagggtcgaccaccgcgcgcactgagaagggcctcgcgctcgtgcgaagccagttc
ctgggcgaatcggcagtgaagtccgtgttcaccatcaatggcttcagcttcgcggggcag
ggccagaatgcgggcctcgccttcatcagcctgaagccatgggaggatcgcccgggtgcg
gacaaccgcgcgcaggcagtcgccggccgtgcgatgggagccttctcgcagttcaaggac
ggcatgatcttcgcgctggtgccgccagcggtgcaggagctcggcaatgcgaccgggttc
gacgtgcagctggtggataccggcgggatcggccatgcgcggctgacgcagacgcgcaac
atgctgctcggggcggccgcgcaggatccgcgggtggcgcaagtccgtccgctgagcctt
gaggacgcgccgcagctgaagatcgtcgtcgatcaggacaaggcacgcgcactcgggctc
gatctggggcaggtcaatgcgacgatctccaccgcctggggtggatcatacgtcaacgac
ttcatcgatcggggtcgcgtgaagcgcgtgtatattcaggccgatcaggcgtttcgcctg
aagcccgaggatctcgcgtccttctatgtgcgcggcgccgacgggcagatggtgccgttc
acgtctttctcgacgatcgaatgggccaatgcgccggtgcagctgacccggtacaacggc
caacccgcgatgcagctgcagggcgcggcggggcaggggctcagcaccggcggcgcgatg
accgcgatcgaggaaatgcatgccaagttgccgccgggcacgcagctggaatggactggg
ctgtcgttcgaggaacggctgtcgggtgggcaggcgccggcgttgtacgcgctgtcgctg
ctgatcgtgttcctgtgccttgccgcgctgtacgaaagctggtcggtgccgatctcggtg
ctgctggtagtgccgctgggcgtggtcggcgcgctgctggcggcgacgctgaccgggctg
aacaacgacatttatctgcaggtgggtctgatcaccacgatcggcgtatccgcgaagaac
gcgattctgatcgtcgagttcgcgcaggagcggattgcggaggggatgaggccgttccag
gccgctgtcgaagcggcgaagctgcggctgcgcccgatcctgatgacgagcctcgcgttc
atcttcggcgtgctgccgctggcggtttcgaccggggcgggtgccggcgggcagaatgcg
atcggccgcgcggtcgtcggcgggatgttgtcggccaccgtgctcgcgatcttcctcgtc
ccgatgttcttcgtggtgatcacgcggctgttcaaccgcggcaagcgtgacgacgaagcc
gatgatgtccgtgacgacgggcgcgaccgcgatggcgaccgcgcgccgcagggagcatga
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