Sphingomonas radiodurans: LLW23_15010
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Entry
LLW23_15010 CDS
T08717
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad00020
Citrate cycle (TCA cycle)
srad00785
Lipoic acid metabolism
srad01100
Metabolic pathways
srad01110
Biosynthesis of secondary metabolites
srad01120
Microbial metabolism in diverse environments
srad01200
Carbon metabolism
srad01210
2-Oxocarboxylic acid metabolism
Module
srad_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srad_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LLW23_15010
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LLW23_15010
Enzymes [BR:
srad01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LLW23_15010
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
WBH16100
LinkDB
All DBs
Position
complement(3179077..3182049)
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AA seq
990 aa
AA seq
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MGYEGQDFSDIAGGVSPAFIDALYARFKASPDSVEPGWRGFFEGLENGVAGPSWSSDRWP
LTSTDDLTSALDPTQMEPAPKPSKAKPAAAAAPAPQAPSQDEIVRAAGDAIRAQLLVRTY
RVRGHLAANLDPLGLNATRELPADLKTEYHGFTDSDIDRPVYMGGTMGLQWATIRELVDI
LRANYCGSVGLEYMHIADVEERRFLQERMEGKDKAIDFTPQGKKAILNKVIEAEQWEKFL
GRKYVGTKRFGLDGGESMIPALESVIKYGGAAGVNEIVFGMAHRGRLNVLANVMGKPLRV
IFHEFAGGSANPDDIGGSGDVKYHLGTSNDREFDGIKVHMSLVANPSHLEAADPVVLGKV
RAIQTIAGDLDDHCKALPVLIHGDAAFAGQGIVWECLGFSGIRGYNTGGCIHFVINNQIG
FTTSPQFARSSPYPSDVAKGVQAPVFHVNGDDPEAVTFATKMAIEFRQKFHRDVVIDMWC
YRRFGHNEGDEPSFTQPLMYKAIRAHPPVSEIYSKRLIEQKVVDQAWVDENIGQFTALLE
GEFESGASYKPNKADWFAGRWSGLSIPADAESARRSVETGIEQKLFDSIGRTLTTVPEDL
AIHKTLARVVDAKRNMFATGENFDWATGEALAFGSLLSEGFGVRLSGQDSGRGTFSQRHA
VWVDQNTERKYVPLWNVEHGHFEVLDSPLSEYGVLGFEYGYALADPKTLVLWEAQFGDFV
NGAQIMIDQFIASGESKWLRANGLVMLLPHGYEGQGPEHSSARPERFLQLCAQDNMQVAN
CTTPANYFHLLRRQMHRSFRKPLVVFTPKSLLRHKLAVSSAKDFVGVSHFRRILSDTNGA
ADEATTRLVLCTGKVAYDLIEARDAAGNTGTQIVRVEQLYPFPTDALAKRIARMPNLTDV
VWAQEEPRNNGYWFFVEPFIEEALGMAGCATKRARYAGRAVAASPATGLMKRHQAEQGAL
IADALGHNVREEIRRTRSAESTKKAGIATG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgaaggccaggatttctcggacatcgccggcggcgtctcgccggccttcatc
gatgcgctctatgcgcgcttcaaggcgtcgcccgacagcgtcgagccgggctggcgcggt
ttcttcgaggggctggaaaacggcgtcgcggggccaagctggagcagcgatcgctggccg
ctgacgagcaccgacgatctcacctccgcgctcgatccgacgcagatggagccggcgccc
aagccatcgaaggcgaagcccgctgcggctgccgccccggcgccccaggccccgtcgcag
gacgagatcgtgcgcgccgctggcgatgcgatccgcgcgcagctgctggtgcgcacgtat
cgcgtgcgcgggcatctcgccgccaatctcgatccgctcggcctcaacgccacgcgcgag
ctgccggccgatctcaagaccgaatatcacggcttcaccgattccgacatcgatcgcccg
gtctacatgggcggtacgatggggctgcaatgggcgacgatccgcgagctcgtcgatatc
ctgcgcgccaattactgcggcagcgtcggcctcgaatatatgcacatcgccgacgtggag
gagcgccgcttcctccaggagcgcatggagggcaaggacaaggcgatcgacttcacgccg
cagggcaagaaggcgatcctcaacaaggtgatcgaggccgagcaatgggagaaattcctc
ggccgcaaatacgtcggcacgaagcgtttcgggctcgacggcggtgaatcgatgatcccc
gcgctcgaaagcgtcatcaaatatggcggcgccgccggcgtgaacgagatcgtcttcggc
atggcccaccgtggccgcctcaacgtgctcgccaacgtcatgggcaagccgctgcgcgtg
atcttccacgaattcgccggcggatcggccaaccccgatgatatcggcggctcgggtgac
gtgaaatatcacctcggcacgtcgaacgatcgcgagttcgacgggatcaaggtccatatg
tcgctcgtcgccaatccgagccatctcgaggcggctgatccggtcgtgctcggcaaggtc
cgcgcgattcagacgatcgcgggcgatctcgatgatcattgcaaggcgctgccggtgctg
atccatggcgacgcggccttcgccggccagggcatcgtgtgggaatgcctcggcttctct
ggcatccgcggttacaataccggcggctgcatccacttcgtcatcaacaaccagatcggc
ttcacgaccagcccgcagttcgcgcgctcgtcgccgtatccgtcggatgtcgccaagggc
gtccaggcgccggtgttccacgtcaacggcgacgatcccgaagcggtcacctttgccacc
aagatggcgatcgagttccgccagaagttccaccgcgacgtcgtcatcgacatgtggtgc
tatcgccgcttcggccacaacgaaggcgacgagcccagcttcacccagccgctgatgtac
aaggcgatccgcgcgcatccgccggtgagcgagatttacagcaagcggctaatcgaacag
aaggtggtcgatcaagcatgggtcgatgagaacatcggccagtttaccgcgctactcgaa
ggcgagttcgagtcgggcgcaagctataagccgaacaaggcggattggttcgccggtcgc
tggtccggcctgtcgatcccggccgatgccgaaagcgcgcggcgcagcgtcgaaaccggg
atcgagcagaagctgttcgattcgatcggccgcacgctgacgaccgttcccgaggatctg
gcaatccacaagacgctggcgcgcgtcgtcgacgcgaagcgcaacatgtttgcgaccggc
gagaatttcgactgggcgacaggcgaggcgctggcgttcgggtcgttgctgtcggaaggc
ttcggcgtccgcctgtccgggcaggattcgggccgcggcaccttctcgcagcgtcatgcc
gtgtgggtcgatcagaacaccgagcgcaaatatgtgccgctgtggaatgtcgagcatggc
cacttcgaggtgctcgacagcccgttgtccgaatatggcgtgcttggcttcgaatatggc
tatgcgctcgccgatccgaaaacgctggtgctgtgggaagcgcagttcggcgacttcgtg
aacggcgcgcagatcatgatcgatcagttcatcgcgagcggcgaatccaagtggctgcgc
gccaacgggctcgtgatgctgctgccacatggctacgaaggccagggtccggagcacagc
tcggcgcggcccgagcggttcctgcagctgtgcgcgcaggacaatatgcaggtcgcgaac
tgcaccacgccggcgaattatttccacctgctgcgccggcagatgcaccgcagtttccgc
aagccactggtcgtcttcacccccaagtcgctgctgcggcacaagctggccgtatcgtcg
gcgaaggacttcgtcggcgtctcgcactttcggcgcatcctgtcggataccaatggcgca
gcggatgaagcgaccacgcggctcgtgctgtgcaccggcaaggtggcgtacgatctgatc
gaggcacgcgatgccgcgggcaacaccggcacgcagatcgttcgcgtcgagcagctctat
cccttcccgaccgacgcgctggcgaagcggatcgcgcggatgcccaacctcaccgacgtg
gtctgggcgcaggaagagccgcgcaacaacggctattggttcttcgtcgagccgttcatc
gaggaagcgctcggcatggcgggctgcgcgacgaagcgcgcgcgctacgccggccgtgcc
gtggcagcatcgcccgccacgggcctgatgaagcgccaccaggcggaacagggcgcgctg
attgccgatgcgctcgggcacaatgtccgcgaggaaatccggcgtacgcgttctgccgaa
tcgaccaagaaggcgggcatcgcgacaggctga
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