Spirosoma radiotolerans: SD10_08880 Help Entry SD10_08880        CDS       T03819                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism srd  Spirosoma radiotolerans Pathway srd03030   DNA replication srd03410   Base excision repair srd03420   Nucleotide excision repair srd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:srd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SD10_08880    03410 Base excision repair     SD10_08880    03420 Nucleotide excision repair     SD10_08880    03430 Mismatch repair     SD10_08880  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:srd03032]     SD10_08880    03400 DNA repair and recombination proteins [BR:srd03400]     SD10_08880 Enzymes [BR:srd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      SD10_08880 DNA replication proteins [BR:srd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      SD10_08880 DNA repair and recombination proteins [BR:srd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      SD10_08880    NER (nucleotide excision repair)     GGR (global genome repair) factors      SD10_08880    MMR (mismatch excision repair)     DNA ligase      SD10_08880   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       SD10_08880 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 BRCT_2 Auto_anti-p27 PTCB-BRCT Nlig-Ia Zn_ribbon_NUD HHH HVO_2753_ZBP DZR_2 Zn_ribbon_ACC Motif Other DBs NCBI-ProteinID:  AKD55000 UniProt:  A0A0E3ZV98 LinkDB All DBs Position 2227131..2229176 Genome browser AA seq 681 aa AA seqDB search MNPQERIAELTNRLNYYNHQYYQNSVSEVDDFTFDKLLAELTSLETQHPEFRQPDSPTAR VGGTISKEFKTVYHRFPMLSLGNTYSEEDLVEFDKRVQKGLNGQSYEYICELKFDGVALS MTYENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIHKTDVPALFEVRGEGFMPLAEFE RINKEREDIGEALLANPRNAASGTFKQQDSAAVAKRRLDCYLYSFLSDVEVFHTHEESLI ALKEWGFNVSQTWRKCTDIREVMLYINEWDTKRFELPLNTDGIVIKVNRYDQQRDLGYTA KSPRWAIAFKYKALAASTTLNGIQYQVGRTGAVTPVALLTPVLLAGTIVKRASLHNSNEI ERLGIQLHDTVFVEKGGEIIPKITGVDLNRRTEKSEPIIYPTTCPACGTPLIRKEGEAHF YCPNERGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDRGLVQTPADLYKLTTNDLLG IEKVFLDEETGKKRIVSFREKTVENILTAIDRSKAQPLPNVLFALGIRYVGNTTAEKLTD YFGSMDAIMNASPEALLAVPDTGPRIAESVVAWFADPENREYVEALRAAGLQFAGEKKVV EQEGDSLTGKTFLYTGTFENFSREELESRIEANGGRLLSGISKKLNYLIVGENAGPSKVE KARKLNVAMIGEDEFMAMLNV NT seq 2046 nt NT seq  +upstreamnt  +downstreamnt atgaatccccaggaacgcattgccgaactgacaaatcgcctaaactattacaaccatcaa tactaccagaatagtgtttcggaagtagatgatttcacattcgataaactattagccgaa ctaacgtcgctcgagacgcagcatcccgagtttcgtcagcctgattcgccaacagcccgt gtgggcggcaccatcagtaaggagttcaagactgtgtaccaccggtttccgatgctttcg ctgggcaacacctactccgaagaagaccttgttgagttcgataaacgggttcagaaagga ttgaacggtcaatcgtacgagtatatctgtgaattgaaattcgatggggttgcgctgagc atgacctacgagaatggtgtattggtgcagggcgccacgcggggcgatggcgttcggggc gatgatattaccaacaacattcggactattcgcacggtgccgttgcgcattcataaaacc gatgtgcctgccttgtttgaggttcggggcgaagggttcatgccattggccgagtttgaa cggattaacaaggagcgggaagatattggcgaggccttactggctaatccgcgtaatgcc gcatccggaacgtttaaacagcaggattcggccgcagtggccaaacgacgtctggactgc tatttatactcatttctgtcagacgttgaggtctttcacacacacgaagaaagcctgatt gcgctgaaggaatggggtttcaacgtctcgcaaacctggcgaaaatgcaccgatattcgg gaggtgatgctatatataaatgagtgggatacgaagcgattcgagcttccgctcaatacg gacggcatcgttataaaagtaaatcgctacgatcagcagcgggatctgggctacacggcc aaaagtccgcgctgggccattgcttttaaatacaaagcactggccgccagcacgacgttg aatggaatccagtaccaggttggccggacaggtgccgtgacgcccgttgccttactaacg cccgtattattggccggaaccattgtcaaacgggcttcacttcataattcaaatgagatc gaacggctgggcattcagcttcacgataccgtttttgtggaaaaaggcggtgaaatcatt ccgaaaataacgggtgtcgatctgaaccgccggaccgaaaaaagtgagcccattatttac ccaacaacctgccccgcttgtggaacgcccctgattcgaaaagaaggcgaagctcatttt tattgtcccaatgagcgcggctgtccgccccagcggcaggcccggttcgagcacttcatc cagcgtagagccatgaatatcgagagcctgggtgaaggaaaaattgaactactcatcgac cggggactggtgcaaacaccagccgacctgtataaactgacgacaaacgacttactggga atcgagaaggttttccttgatgaagaaacgggcaaaaagcgaatcgtcagtttccgggaa aagacggtcgaaaatatcctgacggctatcgaccgctcgaaagcgcagccgctgcccaac gtgctgtttgcgctgggcatccggtatgtgggtaacaccaccgccgagaaactgacagat tattttgggtcgatggatgccatcatgaacgccagtccggaagccctgctggccgtaccc gacacagggccacgcattgccgagagcgttgtcgcctggtttgccgaccccgaaaatcgg gaatatgtagaagcgctccgggcagccggtctacaatttgctggtgagaaaaaagtggtg gagcaggagggcgattcactaacagggaaaacctttctgtatacgggtaccttcgagaat tttagccgcgaggaactcgaatcccgcatcgaagctaacggcggcagattgctcagcgga atttccaagaagctgaactacctgattgtcggtgaaaatgcgggcccatctaaagttgag aaagcccgcaaattaaacgtagccatgatcggtgaagatgagtttatggccatgctgaac gtgtaa

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