Spirosoma radiotolerans: SD10_22300
Help
Entry
SD10_22300 CDS
T03819
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd00300
Lysine biosynthesis
srd00550
Peptidoglycan biosynthesis
srd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SD10_22300
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD10_22300
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
SD10_22300
Enzymes [BR:
srd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SD10_22300
Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
Precursor biosynthesis
Amino acid ligase
SD10_22300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
AKD57216
UniProt:
A0A0E3V9K1
LinkDB
All DBs
Position
5482228..5483706
Genome browser
AA seq
492 aa
AA seq
DB search
MQLKDLFYKIPLLATSGSMNTDVTSLTMDSRKVGPGSLFIAVRGTLTDGHSYIETAIRQG
ASAILCEDFPTDINPNVGYVRVQDSARTMGFAAANFYDQPSRKVKLVGVTGTNGKTSVAT
LLFRLFRSLGYRCGLLSTVQNQIDDEVIPATHTTPDVITTNQLLTRMLAHGCTHVFMEVS
SHAVVQERIAGLTFAGGIFTNITHDHLDFHGTFDNYIRAKKGFFDQLPASAFALTNVDDK
RGLVMLQNTAARKETYSLQTLATFKGKVIADSLFGLNMFIDDREVWFKLIGRFNAYNLLS
VYGTAVLLGEDPTEVLTSLSGITPPSGRFEQVVSDDQIVGIVDYAHTPDALLNVLETINE
LRATDEQDYLPQVITVVGCGGNRDAAKRPIMADIACRLSNRVILTSDNPRNEDPMAILEQ
MQAGVSPVDVKKTITIEDRHEAIRRAVSLSRPHDIILIAGKGHETYQEIKGVKYDFDDRV
VLREAFTERRNQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaagatctcttttataaaattccgctactggcgacctccggcagcatgaac
accgacgtaacgagcctgacgatggactcgcgtaaagtcgggccgggcagtttatttatt
gccgtgcgtggcaccctcaccgacggacattcgtacatagaaaccgctatccgacagggg
gccagcgcgattctgtgcgaagattttccgacagacatcaacccgaatgtggggtatgtc
cgggtgcaggattcggccaggacgatgggctttgcggcagccaacttttacgatcagcct
tccaggaaagtgaaactggttggcgtaaccggcacaaatggcaaaacatccgtagccaca
ctgctcttccggctgtttcgttcgctgggctatcgctgcgggttactctcgacggtgcaa
aaccagattgacgatgaggtgatacccgctacccacacaacgcccgatgtcattacgacg
aatcaactactcacccgaatgctggcgcacggctgtacgcacgtgtttatggaggtcagt
tcgcatgcggtcgtgcaggaacgtattgccggtttgacctttgccggcggtatttttacc
aatattacgcatgatcacctcgattttcacggcacgtttgacaactacatccgggcgaaa
aaaggattctttgaccagcttccggcgtccgcctttgccctgaccaacgtggacgataag
cgcgggctggtgatgcttcagaatacggccgcccggaaagaaacctactcgttgcaaacc
ctcgccacgttcaaggggaaagtaattgccgacagcctgtttgggctgaatatgttcatc
gacgaccgcgaggtttggttcaagctcattggccgtttcaatgcgtacaaccttctgagc
gtatacggaacagctgtattgctgggcgaagacccgaccgaagttctgacatccttatcc
ggcattacgcccccatcgggtcggtttgagcaggtggtttccgatgatcagattgtgggt
attgtggattatgcccacacgcccgatgccctgctgaacgtgctggaaaccattaatgaa
ttacgcgctaccgacgagcaggattacttgccccaagttatcaccgtggtcggctgcgga
ggcaaccgcgatgcggccaaacgcccaattatggccgacatcgcctgccgattgagcaac
cgggtcattctgacctccgacaaccctcgcaacgaagacccaatggcgattctggagcag
atgcaggccggtgtatcgcctgttgacgttaagaaaacaatcacgatagaagaccggcac
gaggccatccgccgggccgtttccctgtcccgcccgcatgacattattttgatcgcgggc
aaaggccacgagacctatcaggagataaaaggcgtcaaatatgacttcgacgaccgggtc
gtactacgcgaggctttcacagaacgtcgaaatcagtaa
DBGET
integrated database retrieval system
