Salpingoeca rosetta: PTSG_01198
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Entry
PTSG_01198 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K13141
integrator complex subunit 4
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_01198
Spliceosome [BR:
sre03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
PTSG_01198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
Cnd1
HEAT_2
PDS5
Cnd3
Motif
Other DBs
NCBI-GeneID:
16077765
NCBI-ProteinID:
XP_004997170
UniProt:
F2U135
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MDMKRGASSGSVGKAGGGGGDGGNGGDDGQQPRKRPHVVSSSSSSSSSSPLPPPPSIKAG
TSTAASIASGGADQHPQKRHLQQHQQQQQQKPATFKRRPRRKAPSATAVAGTKRGSTPSS
TRASTNPSPTPQQPTPSAISAQAPPLQHPMPMMSAPPPARRRPPSVYDVDPAGPGYRSTP
VALSSSSSSMRAEQGQQASNPMPLPMPRQIMQPQARPPPASILPTPNASHANARVPAGLE
QQEAPVVDPSTSAAFATRPIVSQQRTQLRVLTTSDTQDNEFKRMKVDALLSLLDAEGIQE
HVTPLLCALRLACRTALTPAQATSVLQLVVRLSSTSCDADTMCLLLATAKQVLAHSSQSA
LPRTIINSIGTLALNTHDQPLPSVRRRALSLLPFCYAAASHGHQQRHAPDTSETPHRRPS
NAQQAHERATASIGAAAATAGGGDGGGGGGGGCGGGGDQRHGGIDTVNGDSVGGGSVGGS
GDGTAAPQAQHTASTSPLSPPTTATSATEAAGQLTPRCVTDAITLRLQDEDPRVRSDALI
ALRQLLVHGLPPAPHHWPLLKALLGDKRTTIRQHCLECLAVFLPRYQECLAAATRQQEQQ
QGSSGGGGNAGGDEQHLDTDDAVVGHAGNSSPATTNANKPSNTHNSSNNGASDTSNSDTT
NGANGGATSQPASAPAPPEASAAGAADAIVNDAFVSLCDLATDISSAVRAATFRALSHLR
GVSPEHVLQTLDKKLMSHLRTRKSAHEALKEKHGTTKRAVEQALSQQPPQGDIDVHDISI
MSAGACGAFIHGLEDEIHEVRLATLETIRVLALNYKPLALKSLDFLVDMFNDDIDRVRVC
ALRVMTDLSAFFTLQEEQVDMMLGILDDGNATVRHSAHRLFGASRVVNHNCLHVIVASML
AALARYPEDHISIFHCLRRLGASHPTFTAFLCPTLLGFSPHVLSAAAGVEDRAYVALLCL
VCGASASQPRLLRLLPSNVIDHWQQLAVTLPQLFSASQTQPRPTKRQRNGSDRGSGGDGS
GGNVLLENKAALRAALTHLQAGQYARGLKCLHAMQSRLHGVCSGSALATADARVLLLYHY
ITILSATFRTHQHSLPCCVVAQMAPVLVRFCN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaagcgaggcgcgagcagtggctctgtcggcaaagctggtggtggcggtggc
gatggtggcaatggtggcgacgatgggcagcagccacggaagcggccacacgtcgtctcg
tcgtcgtcgtcgtcatcatcatcgtcacccttgccgcccccgcccagcatcaaggcaggt
acgtcaacagctgcgagcatcgcaagcggcggcgcagatcagcacccacagaagcgtcac
ctacaacaacatcaacagcagcaacagcagaagcctgccaccttcaagcggcgacctcga
aggaaggcgccgtcggcaacagctgtagcagggaccaagcgaggcagtacaccaagcagt
acaagggcgagcaccaacccatccccaacaccacaacagccaacacccagcgctatctca
gcacaggcgcctcctctgcaacaccccatgccaatgatgtctgcaccgccacctgcgcgt
cgccgaccgccgagcgtgtacgatgtcgaccccgcggggccaggctaccgatcgacaccc
gtagcattgtcctcgtcttcgtcatccatgagagctgaacagggacagcaggcttccaac
cccatgcctctcccaatgcctcgccagataatgcagccccaggcacggccaccgccagca
tcaatcctccccacgccaaacgcaagccacgcgaacgctcgtgtgcctgcggggctcgag
cagcaggaagcgcctgtggtcgatccgtcaacctccgcggcgtttgcaaccagacccatt
gtttcacagcagcgcacgcagctccgcgtcctgacaaccagcgacacgcaggacaacgag
ttcaagcgcatgaaggttgacgcgctgctgagtctcctggacgcggaagggatccaggag
catgtcacgccgttgctgtgtgcactgcgccttgcctgccgcacagcactcacgccagcg
caggcgacgtcagtcctgcaactcgtcgtgcgcctcagcagcacctcgtgcgacgccgac
acaatgtgcttgctcctggccacggcgaaacaggtgctggcacattcgtcgcaaagcgcc
ctgccacgcaccatcatcaacagcatcggcacgttggccctgaacacacatgaccagccg
cttccctcagtccgccggcgtgcactcagcctccttcccttctgctacgcggccgcttca
cacggccaccagcaacgccatgcgccggacacaagcgagactccccaccgccgtcccagc
aatgcgcagcaagcacatgagcgagccacagcatcaataggcgccgctgctgccactgct
ggtggtggtgatggtggtggtggtggtggtggtggttgtggtggtggtggtgatcaacga
catggaggcatcgacaccgtcaatggtgacagcgttggtggcgggtctgttggtggcagt
ggtgatgggacggcggcaccacaggcacaacacacagcctcgacatcgccactttcacca
ccgacaacagcaacatcagcgacagaggcagcagggcagctgaccccgcggtgtgtgact
gacgccatcacgcttcgattacaagacgaggacccgcgcgtgaggagcgatgccctgatt
gctctgcgacagctgcttgtacatgggctgccgcctgcgccacaccactggccgctcctg
aaggcgctgcttggcgacaagcgcaccacgattcgccagcactgcctggagtgcctggcc
gtgtttctgccgcggtaccaggaatgcctcgctgccgccacacgacagcaagaacagcag
cagggcagtagtggtggtggtggcaatgcgggcggtgatgagcagcacctcgacactgat
gatgcggtagtggggcatgcaggcaattcatcacccgctacaaccaatgccaacaagccc
agcaacacgcacaacagcagcaataacggtgccagcgataccagcaacagcgacaccacc
aatggtgcgaatggtggcgcaacatcccaaccagcatcagcaccagcaccaccagaggca
tcggcagcaggagcagctgatgcgattgtgaacgacgcgtttgtgtcgctgtgcgacctg
gcaacagacatctcctcagcggtgcgagcggccacgttccgcgcactctcgcacctccgc
ggggtgtcgccggagcacgtgttgcagacgctggacaagaagctcatgtcacacctgcgc
acacgtaagagcgcacacgaggcgctgaaggagaagcatggcacgacaaagcgggctgtg
gagcaagcgctgagtcagcagccaccgcagggagacattgacgtgcacgacatcagcatc
atgtctgcgggcgcgtgtggcgcattcatccacgggctggaggacgagatacacgaggtg
cgactggccacactcgagacgatccgcgtgctggcgctcaattacaaaccgctcgccctc
aagtcgctggactttcttgtggacatgttcaacgacgacattgatcgcgtgcgcgtgtgt
gcgctgcgcgtgatgacagacctgagcgcgttcttcacgctgcaggaggagcaggttgac
atgatgctgggcattctggatgacggcaatgccactgtgcggcacagcgcccatcgcctc
tttggcgcatcgcgcgttgtcaaccacaactgcttgcacgtcatcgtcgccagcatgctg
gctgcgctcgcgcggtatcctgaggaccacatctccatcttccactgcttgcgacgcctc
ggtgcgtcccaccccacgttcacggcgttcctgtgcccgacgctgcttgggttcagcccc
cacgtcctcagcgcagccgccggcgttgaggacagggcatacgttgcgctgttgtgtctg
gtgtgtggggcatctgcctcgcaaccgcgcctgcttcgtctcctcccgtcgaatgtcatt
gaccactggcagcagcttgctgtgacgcttccacagctcttctctgcttcacagacccag
ccacggccaacaaagcgtcagcgtaatggtagcgaccgtggcagtggaggtgatggaagt
ggtgggaatgtgctgctggagaacaaggctgcgttgcgagcggcgctgacgcatttgcaa
gcggggcagtatgcgcggggattgaaatgcctgcatgcaatgcagtcgcgcttgcatggg
gtgtgttccggcagtgccctggcaacggcagacgcccgcgtgttacttctctaccactac
atcaccattctctccgccacatttcgaactcaccagcattcgctgccgtgttgcgtcgtg
gcacaaatggctccagtccttgttcgcttttgcaattaa
DBGET
integrated database retrieval system
