KEGG   Salpingoeca rosetta: PTSG_01570
Entry
PTSG_01570        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_01570
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    PTSG_01570
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 16078144
NCBI-ProteinID: XP_004997549
UniProt: F2U0R0
LinkDB
Position
Unknown
AA seq 1332 aa
MNDEEDDGWISTQTRAGERPLAEEDDQDTEADEDEERAVEHVSAPSTTTTTTATTTATTT
ATTTAITTATSTAARSPQRRPAHSTRQGSHEPLQFWKTLERVRQRPPADDSQAALAFSNT
AQQRRAYYSAMYGSSSSGSEDEGGDGHGQRDSHVQQDDDGSAPPAPKRARKSRKPARGTE
QAVPTSPHGRHVQSPRRKMSTTSRAGRATATSTATATAGDGDDRDMRAMASSASSALRAR
HATRSGKTNRKARGASVAPVAKRGTQRSSRQQRHARAYEDEEQEEEEDHDEEYDDDGEEE
GDDDDDGEEQVDDDGDVDEVARRVGKRRDHHHGRGTRTLAHTRRSRRRHHHHHHHHHRRD
QSSPSPSPSPSSSRSSSDDMDGFLAYHEAHKTGGARAKAAGRAGGMASSRRAQRQQQQQQ
DTDSSSGSSDAGEDDHNAIMGARVRRMRERRRYVAAVTAKPRPDLPSSLHQLPSPQPHVV
WMPAQHAVGEGGSPWARLRRTQLSIPGPINQFLRPYQREGVETMAKWLLDGHGGVLADDM
GLGKTVQVIALLATLLQKTYDAAVDAIPKLAAPVLVISPNTVLGTWLEELERWGHFTVGK
FHGSGRTRVLDALTADAAAYDVVVTTYTTFQRDAAGLAQVPWLLVVADEAHKIRSPRAKL
TTAMKSFPVQHRIGLTGTALRNDFKELWCLLDWAWPNALGPLSQFLANVATPIKRGQVMN
GTLDEIELAEQRGRELIDKMKPFFLRRTEVVLAGQLPKKEDRVVFCKMTPLQRKVYENIL
SQDDVVYITQRNLPCLCEANQARERQLTRSQCCYQLTRYHKRGDVCTCGGSTDDPEKIRR
CRKCHCSQEAIASGTNGCMPWSYLIFPLVVLLRNVANHVALLVPRPGDDELTVIKKERDC
AAAFRGEEAWLQRARRNDPTAIGDPEVSGKLKVLLKLLSIWREEDARVLLFSHSLKLLDI
MMDVFRGRGVSYLRMDGNMPTEERQEAINRFNAGTVDVFLLSTKTANTGITLTRANKIVI
FDPSWNPAEDRQAEHRAWRIGQNQDVEVVRLISSGTIEELMYARQLYKQQLAAVALEGRA
QRRFFEGVQGDPSRKGELFGLDNMFASELDEELVKQVIRRRQDEHGMIVAPYELLTERAV
ALQRQYQQQRQQRQQQQRAEQAGDAVADEEEDIELDIDQLFVDDGGPTAPAAANADGPAQ
VAGGGGGDADGPDRVELLLQQCGVSFMHSNARVLGLDVPHNAPEAPRQADGTHAGDGAVD
KAKKRRSLPSLTAAEERQLELETAVQLNHFMRLAASHGCVNLFEFALRVLSSSEEEKAAM
LDAFYGSPPAAE
NT seq 3999 nt   +upstreamnt  +downstreamnt
atgaacgacgaggaggatgacggatggatctccacgcagacgcgggcgggagagaggccg
ctggctgaggaggatgaccaggacactgaagctgacgaggatgaggaacgcgccgtcgag
cacgtgagcgcaccatccacaacaacaaccacaacagcaaccacaacagcaaccacaaca
gcaaccacaacagcaatcacaacagcaacatcaacagctgctcggtccccacagcgtcga
ccagcacacagcacacgccaagggtcccacgagccactgcagttctggaagacactcgag
cgcgtgcgtcagcgtccgccagctgacgacagccaagccgccctcgccttctccaacacg
gcgcagcagaggcgggcgtactattcggccatgtatgggagcagtagcagtgggagtgag
gacgagggtggtgacgggcatggccagcgagacagtcatgtgcaacaagacgatgacggc
agcgcgcctcctgcgcccaaacgcgcacgcaagagccgcaagcccgcacgcggaaccgag
caagccgtacccacgtcaccacatggcaggcacgtgcagtcgcccagaagaaagatgagc
acaacgtcccgtgctggccgcgccaccgccacgtccactgccactgccactgctggtgat
ggcgatgatcgtgatatgcgcgcaatggcatcgtcagcgtcgtcagctctgcgggcacgc
cacgccacccgcagcgggaagacgaataggaaggcacggggagcgtcagttgcacctgtc
gcgaagcgtggaactcagcgttcctcacggcagcaacggcatgcacgcgcctacgaagac
gaagagcaagaggaagaggaggatcatgacgaagagtatgatgatgatggcgaagaagaa
ggtgatgatgatgatgatggtgaggaacaagttgacgatgacggtgatgtggacgaagtt
gcacggcgcgtgggtaaacggcgggaccaccatcacggtcgaggcacacgcacactcgcg
catacgcgacgatcacgacggcgacatcatcatcatcatcatcatcatcaccgccgcgac
cagtcatcaccgtcgccatcgccatcgccatcatcatcacggtcgtcatcggatgacatg
gacgggttccttgcgtaccatgaggcgcacaagacaggcggagcacgtgcaaaggcagcg
gggcgagccggcggcatggcgtcatcgcggcgggctcagcggcagcagcagcagcaacaa
gacaccgacagcagtagcggtagcagcgatgctggcgaggatgaccacaacgcaatcatg
ggcgcgcgtgtgcggcgaatgcgtgagcggcgccgctacgtcgctgctgtgacggccaaa
ccccggcccgacctcccctcgtccctgcatcagctcccatcaccgcagccgcacgtcgtg
tggatgccggcacagcacgcggtgggggagggtgggtcgccgtgggcgcggctgcggcga
acacagctgtccatcccggggcccatcaaccaatttctgcgcccgtaccagcgggagggg
gtggagacgatggcaaagtggcttttggatgggcacggcggcgtcctcgcagacgacatg
ggtcttggaaagactgtgcaagtgattgcgctgcttgcgacgctgttgcagaagacgtat
gatgccgccgttgacgcgatcccaaagcttgcagcgcctgtgctggtgatttcgccaaac
acggtgcttgggacgtggctggaggagcttgagcggtggggccacttcaccgtcggcaaa
ttccacggcagcgggcgaacgcgcgtgctggatgcgctcacggctgatgctgcggcgtac
gacgtggtggtgacgacatacacgaccttccagcgcgacgctgcgggcctggcgcaggtg
ccgtggctgctggtggtggcggacgaggctcacaagatacggtcgccacgggcgaagctg
acgacggcgatgaagtcattccccgtccaacaccgcatcgggctcacgggcactgctctt
cgcaacgacttcaaggagctgtggtgccttctggactgggcctggccaaacgcgcttggg
cccttgtcccagtttctggcaaatgtcgccacgcccatcaagcgagggcaggtcatgaat
ggcacgctggacgaaatcgagttggcagagcagcgcgggcgggagctcattgacaagatg
aagcctttcttcctgagacgcaccgaggttgtgctcgctggccagctgccgaagaaggag
gatcgtgtcgtcttctgcaagatgacaccgctgcagcgaaaggtctacgagaacattctt
tcgcaggacgacgtcgtgtacatcacccagcggaacctgccgtgtctgtgcgaggcgaat
caagcccgcgaacggcaactgacgcgttcccagtgctgctatcagctcacccgctaccac
aagcgcggggacgtgtgcacttgtggcggcagcactgacgatccagagaagattcgtcgc
tgccgcaagtgccactgctcccaagaggccatcgccagcggaaccaacggctgcatgcca
tggagctacctcatcttccctcttgttgttctcctgcgcaacgttgcgaatcacgtcgct
cttctcgttccgcgcccgggcgacgacgagctcaccgtcatcaagaaggagcgggactgt
gctgccgcctttcgaggcgaggaggcgtggctgcagcgcgcgcggcgaaacgaccccacc
gccattggcgacccagaggtgtccggcaaactcaaagtgctgctgaagctgttgtccatt
tggcgcgaggaagatgcgcgtgtcctcctcttctcacactccctcaaactcctcgacatt
atgatggatgtgtttcgagggcgcggcgtgagctatcttcgcatggacggaaacatgccc
accgaggagcggcaagaggcaatcaatcgcttcaacgccggtaccgtcgacgtgtttctc
ctctccacgaagacggccaacacaggcatcaccctcacccgcgccaacaagattgtcatc
tttgatccaagctggaatccggctgaggaccgccaggcggagcaccgcgcgtggcgcatt
ggacaaaaccaggacgtggaggtggtgcggctcatctcctccggcaccatcgaggagctc
atgtacgcacgacaactgtacaagcagcagctggcggccgtggcgctagaggggcgggca
cagcgcaggttctttgagggtgtgcagggtgacccgtcccgcaagggcgaactgtttggg
ctcgacaacatgtttgcatcggagctggacgaggagctggtgaagcaggtcatccgccgc
cgccaggacgagcacgggatgattgtggcgccgtacgagctgctgacagagcgcgccgtc
gccctccagcgtcagtaccaacagcagcggcagcaacgacagcagcagcagcgagccgag
caagcgggcgatgccgtggccgatgaggaggaagacattgagcttgacattgaccagctg
ttcgtggacgatggtggtccaaccgcgcccgcagccgcaaatgccgacggccctgcacag
gtggcgggcggtggaggcggcgatgctgatgggccagacagggtggagctcctgctgcag
cagtgcggtgtttccttcatgcactccaacgcgcgtgtgctgggattggatgtgccgcac
aacgcgcccgaagcaccgcgtcaggcggacggcacacacgcaggcgatggtgctgtggac
aaggcaaagaagcggcgaagcctgccctcgctaacggcagcggaagagcgacaactggaa
ctggagacagcggtgcaactcaaccactttatgcggctcgcagccagtcacgggtgcgtg
aatctgttcgagtttgcactgcgcgtgctctcgagcagcgaagaggagaaggcggcaatg
ctggacgcgttctacggatcgccaccagcggcggagtga

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