KEGG   Salpingoeca rosetta: PTSG_02460
Entry
PTSG_02460        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
sre  Salpingoeca rosetta
Pathway
sre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PTSG_02460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_02460
Enzymes [BR:sre01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     PTSG_02460
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PTSG_02460
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 16077544
NCBI-ProteinID: XP_004996952
UniProt: F2U296
LinkDB
Position
Unknown
AA seq 474 aa
MRSRFFPANNAADAVGGRTAKSRCSDANKATTTPQHNRRQSHTCIHSQSSAEATTAQEAS
VAQEAGARGYQQDLPGTMGRTTRVAKAEQEEPGESETRTSSSSTTTTTMTTAIATTAIAT
TAIATTATATATRTTTKSSLSTFIAKRRRSARIAAQAQAASSETAAQERHHHQQHHTHDQ
GQIRNQAHKHNHSSHNHHHDDHKRQLPSPTSSPKKTRAKLRKQEHRTGKSLSKRLDRLVP
RGRVFKKGRVCAGVREADALQLKLPDILSDDLAVLFVGINPGVWSSARGHHYAGPGNHFW
PCLNASGLLPQGVRLSYEDDLNCINYGIGFTNMVSRTTRGMADLPKHEIKAGTQHVMAVV
ANYRPRVVCFNGKGIYEIFSNQKRCSYGLQDASIHGVPVFVMPSTSPRGAAFPRWTDKLQ
FFQQLQGLVHRHSTDAIPQSTATAAKEEADPQDDERQPSEGQSDIKKEVKQEAA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgcgcagccggttcttcccagccaacaacgctgctgacgctgtgggtgggaggacagcc
aagagcaggtgcagcgatgcgaacaaggcgacgaccacgccacagcacaaccggcgccaa
tcgcacacgtgcattcacagccagagcagtgcagaggcaacaacagcacaagaagcaagc
gtagcacaagaagcaggggcacgaggttaccagcaggatttgcctggcacgatgggtaga
acaacaagggtagccaaggcagagcaggaggagccaggggagagcgagacaagaacatcc
agctcctcaacaacaacaacaacaatgacaacagcaatagcgacaacggcaatagcgaca
acggcaatagcgacaacggcaacggcaacggcaacgaggacgacgacaaagtcatcgcta
tcaacgttcatcgccaagaggcgacgaagtgccaggatcgctgcccaggctcaggcagcc
tcgagtgaaacagcagcccaagaacgtcaccaccaccaacaacaccacacccacgaccag
ggacagatccgcaaccaagcacacaaacacaaccacagcagccacaaccaccaccacgat
gaccataagcggcagcttccgtcaccaacatcctcgccgaagaagacccgtgcgaaactt
cgaaagcaagagcacaggaccggcaagagcctcagcaagcggctggaccgcctcgtgccc
cgcgggcgcgtgttcaaaaagggccgtgtgtgcgctggtgtgcgcgaagctgacgcctta
cagctcaagctaccagatatcctgagcgacgacttggctgtgctgtttgtcggtatcaat
ccaggcgtgtggagcagtgcccgcggtcaccattatgctggccccggcaaccacttttgg
ccatgcctgaatgcgtctggcttgctaccgcagggcgttcgcctctcttacgaggatgac
ctcaactgcatcaactacggcatcggcttcaccaacatggtcagccgcaccacccgcggc
atggcagatctccccaaacacgagatcaaggccggtacccagcacgtcatggcagtggtg
gcaaattatcgacctcgtgttgtctgcttcaacggcaaaggcatttacgaaatcttttcg
aatcagaagcgctgttcatatggtttgcaagacgccagcattcacggggtgcccgtgttt
gtgatgccatcaacaagcccacgtggcgcagcattcccaagatggacggacaagctccag
ttcttccaacagctccaagggctggtacaccgacactcgactgatgcaattccacaatcc
acggccactgcggcgaaggaggaagcagacccccaagacgacgagcgacagcccagcgaa
ggacagagcgacatcaagaaagaagtcaagcaagaggcagcatga

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