Salpingoeca rosetta: PTSG_02762
Help
Entry
PTSG_02762 CDS
T04136
Name
(RefSeq) Eftud2 protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
sre
Salpingoeca rosetta
Pathway
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_02762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_02762
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PTSG_02762
Complex C
U5 SnRNP specific factors
PTSG_02762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
DUF4706
Motif
Other DBs
NCBI-GeneID:
16076851
NCBI-ProteinID:
XP_004996265
UniProt:
F2U388
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MDEDLYDEFGNYIGPDIASEDSEDELPDVLPEQDAPRPMHADEDMMDEMRQRQMEEQGQA
MEEEEDVPGSAIVLHEDKQYYPSAEDVYGKDVETVVQEEDTQMLSEPIIKPKVEKSYSVA
EEELPDTVYDKEFLADMMDHPDLIRNVAIVGHLHHGKSCFLDMLVEETHAVAWGPEAAEK
PVRYGDMLFTEQERQLSIKSTPMSFLLPDTRGKSYVVNVMDTPGHVNFVDEVTAACRVAD
GVAVVVDAVEGVMLNTERVIKQAAMAKIPVTLIINKIDRLVLELKLPTSDAYHKLLHTLD
EVNTLLVKYGDGIEDNLLSPTKGNVCFASTQYGFCFTLHSFAKIYSNTFGGGFDHRQLAE
RLWGDVYFHPEKRSFSRKPPTSQTPRSFVHFVLEPLYKIFSQVVGEADFTLPQLCAELGI
ELKKSETRMNVRPLLKTVFTRFFGSSTGFVDMVRDFVPSPKENAPTKVHLNYTGPLGDDE
PLGKALLACDPNGPLMINVVKLYSSQDGTRFDAFGRVMSGTLYNHTDVKVLGENYTLDDP
EDSCVERASKLFIPEARYKVEVNRVPAGNWVLIQGIDGPIMKTATVTTPTSNDDADIFAP
LKFDTISSIKIAVEPVNPSELPKMTDGLRKINKSYPLATTRVEESGEHVILGTGELYLDC
IMHDLRKMYADIDIKVADPSVAFCETVVETSSLKCYAETPNKKNKLTMIAEPLDKGLAED
IEKGVRPSSLGWGLFWFVCACVCVCVHAHVCASVRPCVCAWACVEGPLCDEPMRNTKFKL
LDAAIADMPIHRAGGQIIPTARRVAYSAFLMATPRLMEPYYYVEIQAPGDCVSAVYTVLA
RRRGHVTQDAPKAGSPLYNVKAYIPAIDSFGFETDLRTHTQGQAFCLSVFDHWQIVPGDP
LDKSIVLKPLEPQPAPHLAREFMVKSRRRKGLSDDVSVNKFFDDPMLLELAKQDVVLGAN
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggacctgtatgatgagtttggcaactacattgggccagacattgcctccgag
gacagcgaggatgagctgccggatgtcctgccggagcaagacgctccccgtcccatgcat
gccgatgaggacatgatggatgagatgaggcagaggcagatggaggaacagggccaagcc
atggaagaagaggaagacgtccctggctcagccattgttctgcacgaggacaagcagtac
tacccgagtgcagaggacgtgtacggcaaagatgtggagacagttgtgcaggaagaggat
acgcagatgctgtccgagcccatcatcaagcccaaggtggagaagtcatacagcgtggca
gaggaagagctgccagacaccgtctacgacaaagagttcttggccgatatgatggatcac
cctgacctgattcgcaacgtcgccatcgtggggcacctgcaccacggcaagagttgcttc
ttggacatgctggttgaggaaacacacgccgttgcctggggtccagaggcggcagagaag
cctgtccgatacggcgacatgctgtttacggagcaggagcgacagctgtccatcaagtcg
acgccaatgtcgttccttctgccagacacccgcggcaagtcgtatgtggtgaacgtcatg
gacacgcccggccacgtcaactttgtggacgaggtgacggctgcgtgccgcgtggcggac
ggcgttgctgttgttgtcgacgctgtggagggtgtcatgctcaacacggagcgcgtcatc
aagcaggccgccatggcaaagatccccgtcaccctcatcatcaacaaaatcgacaggctt
gtgcttgagctgaagcttccaacctctgacgcgtaccacaagctgctgcacacgctggac
gaggtcaacacccttctcgtcaagtacggcgacggcatcgaggacaacctcctctcccca
acgaagggcaacgtgtgctttgccagcacccagtatggcttctgcttcacattgcactcc
tttgccaagatctacagcaacacgttcggcggcgggtttgaccaccgccagcttgcggag
cggctgtggggggacgtgtactttcacccggagaagcgctcattcagccgcaagccaccc
acctcccagacgccacgctcctttgtgcactttgtcctggagcccttgtacaagatcttc
agccaggtggtgggcgaggcggatttcacgctgccgcagctgtgcgcagagctgggcatt
gagctgaagaagagcgagacgcgcatgaacgtgcggccgctgcttaagacggtgttcacc
cgcttctttggctcctccacgggctttgtcgacatggtccgcgactttgtcccctcccca
aaggaaaacgccccaacaaaggtgcatctgaactacactggtccgcttggcgacgacgaa
ccgctgggcaaggcgctgctggcgtgcgaccccaacggcccgctcatgatcaacgttgtc
aagttgtactcgtcccaggacggcacgcgctttgacgcctttggccgcgtcatgagcggc
accctctacaaccacacagacgtcaaggttctcggcgagaactacacgctggatgacccc
gaggactcgtgcgtggagcgcgcaagcaaactcttcattccagaggccaggtacaaagtt
gaggtgaaccgcgttcctgcaggcaactgggtcctcattcaagggattgacgggccgatt
atgaagacggcgactgtgacgacgccgacgagcaacgacgacgcagacatcttcgccccg
ctcaagtttgacaccatctcctccatcaaaatcgctgtcgagccggtgaacccatctgag
ctgccgaagatgactgatggtctgcggaaaatcaacaagagctacccgctcgcaaccacc
cgcgtcgaagaatcaggcgagcacgttatcctgggcacgggcgagctgtaccttgattgc
atcatgcacgacctgcgcaagatgtacgccgatattgacattaaggttgctgatccgagt
gttgcgttttgcgagactgttgttgagacgagctcgctcaagtgctatgcggagacgccc
aacaagaagaacaagctcaccatgattgccgagccgctcgacaagggccttgccgaggac
attgaaaagggggtgcgtccttcatctctggggtggggtttgttttggtttgtgtgtgca
tgtgtgtgtgtgtgtgtgcatgcgcatgtgtgtgcgtctgtgcgtccgtgtgtctgtgcg
tgggcatgtgtggagggcccgctgtgcgatgagccgatgcgcaacaccaagttcaagctg
cttgatgcggcgattgcggacatgccgatccaccgcgctggcgggcagattatcccgact
gcacgccgcgtggcgtactcggccttcctcatggccaccccacgcctcatggagccctac
tactacgtcgagatccaggccccaggagattgcgtgtctgcggtgtacactgtgcttgcg
cgccgtcgcgggcacgtcacccaggatgcaccaaaggctggctcgccgctctacaacgtc
aaggcgtacattcctgcgattgattcatttgggtttgagacggatttgcggacgcacacg
caagggcaggcgttttgcctgtctgtgtttgaccactggcagattgtgcctggcgaccca
ctggacaagtcgattgtgctcaagccattggagcctcagccggcgccgcaccttgcacgc
gagtttatggtcaagtctcgccgccgcaagggcctgagcgacgacgtgagcgtgaacaag
ttctttgatgaccccatgctgcttgagcttgcaaagcaggacgttgtgcttggtgcaaac
ttctaa
DBGET
integrated database retrieval system
