KEGG   Salpingoeca rosetta: PTSG_08097
Entry
PTSG_08097        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K10260  F-box and WD-40 domain protein 7
Organism
sre  Salpingoeca rosetta
Pathway
sre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PTSG_08097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sre04131]
    PTSG_08097
   04121 Ubiquitin system [BR:sre04121]
    PTSG_08097
Membrane trafficking [BR:sre04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    PTSG_08097
Ubiquitin system [BR:sre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     PTSG_08097
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I F-box-like WD40_Gbeta F-box WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 ASA1 Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_EML_2 CFAP251_N Beta-prop_SPT8 F-box_4 Beta-prop_Aladin Beta-prop_Nup120_160 F-box_COS111
Other DBs
NCBI-GeneID: 16071679
NCBI-ProteinID: XP_004991117
UniProt: F2UHZ6
LinkDB
Position
Unknown
AA seq 349 aa
MMDEREDVEDGTEAAAMNASSGSSSSHSHHHAHVFSERHQRGATDDQEEEGHTSVVSTSP
TAMVQAALPEDVDSWVHEFMRWTSERQSQAADALIAAIQQRDGEGGLRLLYRRVHSFLHV
DFLAMLPEELAINVLRFLDTRSVCTCAMVSKRWRRVVNLDRVWKPRVLQDFNPHTLEVLI
NRTKHILPHRLTWKQMYELRYRCETQWQSPTVATQPRHTFRGHTGVVTCLISVGDDRVLS
GDTNGALHVTCLRTQRLVGQLQGHSQGVWCLDVDGTTAVSGSCDRTVRVWDLERLQCLHV
LRGHTSTVRCVAITDGLVFSGARDAAVRVWDVATGNCLHTLVEHTDSVR
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgatggacgagcgggaagacgtggaggatggcacggaagcggcagcaatgaatgcgagc
agcggcagcagcagcagccatagccaccaccacgcgcatgtgttctcggagaggcaccag
cgtggagcaacagatgaccaggaagaagaaggacacacatccgtggtgtcgacgtcgccg
acagccatggttcaggctgcgctgccagaggacgtggacagctgggtgcatgagttcatg
cgatggaccagtgagcgacaatcacaggcagcagatgcgctcatcgctgctatccagcag
cgcgacggcgagggtggcctgcgcctgctgtacaggcgagtccactcgttcttgcacgtt
gacttccttgccatgcttccagaggagctcgccatcaacgtcttgaggttcctcgacaca
aggtctgtctgcacatgcgccatggtctcgaagcgatggcggcgtgttgtcaacttggac
cgagtctggaagccccgtgtactccaggacttcaacccccacacgctggaagtgctcatt
aaccgaacaaagcacatcctccctcaccgtttgacatggaagcagatgtatgagttgcga
tatcgctgcgaaacgcagtggcaatcgccaacagttgctacacagccgcgtcacactttt
cgaggacacaccggcgtggtgacgtgtctcatcagcgttggtgatgatcgcgtgctgtcc
ggcgacacgaatggtgctcttcacgtcacctgtcttcgcactcaacggcttgtgggccag
ctgcagggccattcccagggcgtctggtgcctcgatgtggacggaacaacggccgtcagc
gggtcgtgcgaccgcacagtcagggtgtgggaccttgagcggttgcagtgcctgcatgtt
ctgcgcggacacacgtccaccgtccgttgtgtcgccattacagacggcctcgtcttcagt
ggcgcccgcgatgccgccgttcgtgtatgggatgtggcaacaggcaactgcctgcacacg
ctcgtcgagcacacagactcagtcaggtag

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