KEGG   Salpingoeca rosetta: PTSG_11988
Entry
PTSG_11988        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K19656  intraflagellar transport protein 122
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sre03037]
    PTSG_11988
Cilium and associated proteins [BR:sre03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   PTSG_11988
SSDB
Motif
Pfam: Beta-prop_IFT122_2nd Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 Zn_ribbon_IFT122 WDR55 EIF3I ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Zn_ribbon_IFT122_C Beta-prop_WDR19_1st TPR_IF140-IFT172 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th TPR_GEMI5 Beta-prop_WDR75_1st Beta-prop_IFT80_2nd Beta-prop_WDR35_2nd Beta-prop_IFT140_2nd Clathrin TPR_7 DUF1231 TPR_IFT80_172
Other DBs
NCBI-GeneID: 16076448
NCBI-ProteinID: XP_004995862
UniProt: F2U4R0
LinkDB
Position
Unknown
AA seq 1211 aa
MRSMPVWVDTVHNQQGERQSIYSLAFRPDGTQLIAGAGARVLVYEVADGQVIASLKGHKD
VVYCVAFSNDGTLFASGAADKTVIVWDGRTLSGQLKYSHNDTIQALAFNPLNNILASCSS
SDFGFWSKDITTVEKTRVSSRICAASWTNDGQYIALGHFNGNVSIRNQRGEEKVLIDRQG
RGPVWSLQWNPSKNEKTDTLAVCDCNQRLSFYLLSGRQIGKERVLDYDPCSLSYFSDGNY
LVMGGSNRKAGLYTRDGIHLGDICEQEGWVWSCAARPGQNYVAVGCQDGTIALHHLVFST
VHGLYRERYAFRRNMTNVVVQDLSAGTESRVPCRELVKKIAIFKNRLAVQLPKQINVYEM
EAMDSGKLKFRLMCKLRRNFECNLLVVCSKHIILCQERRLQSWTFDNQKEREWSTDSMIR
YIKVIGGPDGREGLLVGQKNGTILQIFVDNPFPIELIKQATPVRCLDLSSQRTKLAVVND
HGTCLVYDLATKDLLYQEPHANSVAWNTQNEDMLCYSGNGMLHIKAANFPLHVQKLQGFV
VGFSGSRIYCLHVHSMKPVDVPQSHSMHQYLKKGEYDGAYRVALTRSVPMEALEGLNFEV
AKQSFIRVRDIRYLDLIHRIQERERMGMGDDPDVYRAQIYAYQGRFEEAAKLYARAGQPR
LAMEMYCDLRQFDRAKKYVDSSNAEDVQAFMKKQAEWSKTANDPLLAIDILNAAGEEIAS
INMMGENGMVQKLIDKARATNSAETEVLNRIVYWLQKLDQISLAAEVCEKMNDNRKLVEL
YVSAKRWEDAFALANRLNEFQEDIYHPYADWLAENDRFDEAQEAYRLAGLEDKAVQVLEV
LAHNAVIERRFNDAGFYFWKLADYKLKAIKSAAGDEGFDLANQDEEIKTYETFEHRADLY
QAYHAISRYIEEPFTSHSTDNLLSICNFLLNAISSEVPFGMSKFNVLFATAKLGRQLGAF
KLARNAIEKMRTLRVPATFREHVNVQAVAIRCKPFEDGEDLQPVCYRCSLPNNLWAGSLS
CSNCVHPFVLSKYSFDVLPLVEFSPDVDISDAEALQLIQDDSTLGSKRGSGSTVTSGGAQ
VMSMDDDEDEEEDPFVQSLARFESGSSSYEIVRVDREMLKKMPSNEVFVQRWGAPLQHRY
YRNVLADIEVTMCSSCFNFFGTDEWERVTLESGKCPLCRASTDVDEESEAPAAAASGSKV
LLGSQPASSSA
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgcgttccatgcccgtgtgggtggacacggtccacaaccaacaaggcgaacgccagagc
atctactctctggcatttcggccagatggcacgcagctcatcgccggtgccggtgctcgc
gttctggtgtacgaggttgccgacggccaagtgattgcctccctcaagggccacaaggat
gtggtgtactgtgttgccttctccaacgatggcacgttgtttgccagtggcgccgctgac
aagacggtcattgtgtgggacggccgcaccctctctggccagctcaaatacagccacaac
gacaccattcaagcgctggccttcaacccgctcaacaacattctcgccagctgctcctcc
tccgactttgggttctggtccaaggacatcaccactgttgagaagacgcgtgtatcttcc
cgcatctgcgcagccagctggaccaacgacggccagtacattgccctcggccacttcaac
ggcaacgtcagcatccgcaaccagcgcggggaggagaaggtgctgattgaccgccagggc
cgcggtcccgtctggtccctccagtggaacccgagcaagaacgagaagacggacacgctc
gctgtctgcgattgcaaccagcgcctcagcttctatctcctcagcggccgccagattggg
aaggagcgtgtgctggactacgacccgtgctcgctgtcgtacttctctgacggcaactac
ctggtgatgggcgggtcgaaccgcaaggccgggctgtacacgcgcgacggcatccacctc
ggcgacatctgcgagcaggagggctgggtctggtcttgcgctgcacggcctggccagaac
tacgtggcggttggctgccaggacgggacgattgcgctgcaccacctcgtcttctccacc
gtgcacggcttgtaccgggagcggtacgcgtttcgccgcaacatgaccaacgtcgtggtg
caggacctctccgccggcacagagtcgcgcgtgccgtgtcgggagctcgtcaagaaaatt
gccatcttcaagaaccggcttgcggtgcagctgccgaagcagatcaacgtgtatgagatg
gaggcgatggacagcggcaaactcaagttccgcctcatgtgcaagctgcggcgcaacttt
gagtgcaacctgttggttgtgtgctcgaagcacatcatcctgtgccaggagcgccgcctg
cagagctggacctttgacaaccagaaggagagggagtggagcacggattcgatgatccgc
tacatcaaagtcattggcggccccgacggccgcgagggactgctcgttggtcagaagaac
ggaacgattctgcagatctttgttgacaacccgttcccgattgagctgatcaagcaggcc
acccctgtccgctgcctcgacctcagctcccagcgcacgaagcttgcggtggtgaacgac
cacgggacgtgcctcgtgtacgacttggcaaccaaggacctgctgtaccaggagccgcac
gccaactctgtcgcctggaacacccagaacgaggacatgctgtgctacagcggcaacggc
atgctgcacatcaaagcggccaacttcccgctccacgtgcagaagctgcaggggtttgtc
gtcggcttctccggctcccgcatctactgcctccacgtccattccatgaagcccgttgac
gttccgcaatcgcactcgatgcaccagtacctgaagaagggcgagtatgacggtgcatac
cgcgtggccttgactcgctcggtgccgatggaggcacttgagggcctcaactttgaggtt
gccaagcagtcattcatccgcgtccgggacatccgctacctcgacctgatccaccgcatc
caggagcgggagcgcatgggcatgggtgacgacccggacgtgtaccgtgcgcagatctac
gcgtaccagggacgctttgaggaggccgccaagctgtatgcccgcgcagggcagcctcgc
ctcgccatggagatgtactgcgacctccgccagtttgaccgcgcgaagaaatacgttgac
tcgtccaacgcagaggatgtgcaggcgttcatgaagaagcaggccgagtggtccaagacg
gcgaacgacccgctgcttgcgattgacattctgaacgctgctggcgaggagattgcgtct
atcaacatgatgggcgagaatggcatggtgcagaagctcatcgacaaggcccgcgccacc
aacagcgccgagacggaggtcctgaaccgcattgtgtactggctgcagaagctcgaccag
atttccctcgccgcggaagtctgcgaaaagatgaacgacaaccgcaagcttgttgagctg
tatgtctctgccaagcggtgggaggatgcatttgcgctggcgaaccgcttgaacgagttc
caggaggacatctaccacccatacgcggactggctcgctgagaacgacagattcgacgag
gcacaggaggcatatcggctggcaggtctcgaggataaggccgtgcaggtgctggaggtc
ctcgcacacaacgccgtcattgagcgccgattcaacgacgcaggcttctacttctggaag
ctggcggactacaagctcaaggcgatcaagagtgctgctggcgacgagggcttcgatctc
gcaaatcaggacgaggaaatcaagacttacgagacattcgagcaccgtgctgatctgtac
caagcgtaccatgccatcagccgctacatcgaagagccattcacatctcactcaacagac
aacctcctctccatctgcaacttcctcctcaacgccatctcctcggaggttccgtttggc
atgtccaagttcaatgttctgtttgcgactgccaagcttggtcgccagctaggcgccttc
aagctcgcccgcaacgccatcgagaagatgcgcacactcagggtgcctgccacgttccgc
gagcacgtgaatgtgcaagcggttgccatccggtgcaaaccgtttgaggacggagaggat
ctgcagcccgtgtgctaccgctgctcactccccaacaacctctgggctggctccctctcc
tgctcaaactgcgtccacccctttgtcttgtcaaagtactcctttgacgtgctgcccctt
gtggagttctcaccagacgtcgacatctccgacgcagaggcgcttcagctcatccaggac
gattcgacgctcggatcaaagcgtgggagcggcagcaccgtcaccagcggcggtgcgcag
gtgatgtcgatggacgacgatgaagacgaggaggaggacccgtttgtccagtcgctcgcc
cgatttgagagcggctcgtcgtcctacgagattgttcgtgtcgaccgcgaaatgctcaag
aagatgccgtcaaacgaggtgtttgtgcagcgttggggtgcaccactgcagcaccgctat
taccgcaacgtgcttgccgacatcgaagtcaccatgtgctcgtcctgcttcaacttcttt
ggcaccgacgagtgggagcgtgtcaccctcgagtccggaaaatgccctctttgccgagcc
agcacggatgttgatgaggaatctgaagcacctgctgccgcggcgagcggatcaaaggtc
ctcctcggatcccaaccagcttcatcgtccgcgtaa

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