Sediminicoccus rosea: LHU95_05575
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Entry
LHU95_05575 CDS
T08103
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srf
Sediminicoccus rosea
Pathway
srf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHU95_05575 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srf03400
]
LHU95_05575 (nth)
Enzymes [BR:
srf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LHU95_05575 (nth)
DNA repair and recombination proteins [BR:
srf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHU95_05575 (nth)
Prokaryotic type
LHU95_05575 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
UPY39303
UniProt:
A0A9E7D4I5
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All DBs
Position
1246874..1247518
Genome browser
AA seq
214 aa
AA seq
DB search
MSREQAGAFIRSIAASNPEPETELLYTDAFSLLVAVVMSAQATDAMVNKVTPGLFAAAPT
PAAMAALGAEGIGQLIRRIGLWQAKAKNVAALSAMLVERHGGEVPADRAALEALPGVGRK
TANVVLNVLFGEATMAVDTHIFRLGNRTGLAPGKTTRVVEDGLVKRIPPELLRDAHHWLI
LHGRYICKARAPECWRCPAALHCNYKDKVKAPGL
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgagcaggcgggggccttcatccgctccatcgctgccagcaacccagagccc
gagaccgagctgctctacaccgatgccttctcgctgcttgttgccgtcgtcatgtcggcc
caggcgacggatgccatggtgaacaaggtgacgccagggctgtttgccgcggcccccaca
cccgccgccatggccgcgctgggtgccgagggaatcggccagctgattcgccgcatcggg
ctgtggcaggcgaaggcgaagaatgtcgccgccctctcggccatgctggtggagcggcac
ggcggtgaagtgcccgccgatcgcgcagcactcgaggccctgcctggcgtgggtcgcaag
accgccaatgtcgtgctgaacgtgctgttcggcgaagccaccatggcggtggatacgcat
atcttccgcctgggcaaccgcactggcctggcgcccggcaagacgacgcgtgttgtggag
gatgggctggtgaagcgcattccgcctgagttgctgcgcgatgcgcatcactggctgatc
ctgcatgggcgttacatttgcaaggcccgggcgcctgagtgctggcgttgccctgccgcg
ctgcattgcaactacaaggacaaggtcaaagcccctggcctatag
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