Sediminicoccus rosea: LHU95_07220
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Entry
LHU95_07220 CDS
T08103
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srf
Sediminicoccus rosea
Pathway
srf01501
beta-Lactam resistance
srf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHU95_07220
01503 Cationic antimicrobial peptide (CAMP) resistance
LHU95_07220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_07220
01504 Antimicrobial resistance genes [BR:
srf01504
]
LHU95_07220
Transporters [BR:
srf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHU95_07220
Antimicrobial resistance genes [BR:
srf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHU95_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MerE
Motif
Other DBs
NCBI-ProteinID:
UPY38476
UniProt:
A0A9E7DA88
LinkDB
All DBs
Position
1597410..1600568
Genome browser
AA seq
1052 aa
AA seq
DB search
MARFFIDRPVFAWVIAIGIMLAGALALRGMAVSQYPAIAPPTIAINVTFPGASAETVQAT
VVQVIEQQLTGIDNLLFFDSQTTKDGQARIQLTFAPGTNADTAQVQVQNRVQLAVPRLPQ
TVQQQGLRVVKSAGNWMLIVGFYTTDNSMERLDITDFLAANVQDPISRTPGVGDFQVFGA
QFAMRIWLDPAKLINFGLTPADVAAAVRAQNVQVSSGEMGGLPAVPGQQLNATIIGPSYL
QTVEEFGAILMRVRADGSQVRLRDVARLEIGGENYAISTQLDGRISSGIGIRLASGANAL
DTAAAVRATIDSLRPSFPPGLEVTYLQDTTPFVQRSIKSVIMTLIEAVALVFLVMLLFLQ
NLRATLIPTMAIPVVLLGTFAVLSALGFSINTLTLFGIVLAIGLLVDDAIVVVENVERVM
AEEHLSPLEATRKSMDQITGALIGIGLVLSAVFLPMAFFGGSVGVIYRQFSVTIATAMGL
SVLVAIFFTPVLCATMLKPHKPGQGTRGFYGWFNRGFDRTTNGYLWGVRASLRRPARMLM
VYAALLGALGYAFLRLPGGFLPNEDQGIAFVQVTAPPGATADRTQRALDEVGRYLREEEA
GVVDSLFAINGFSFGGRGQASGLGFITLKDWDLRPGRENSVGALTERINRRFGTYQDALI
NASSPPAIRELGNATGFSFQLLDRGAQGHAALMEARDQLLRLAQASPILSRVRPNGLNDE
AQFRLIIDWERASALGLTITDINQTLSTAWGATYVNDFMDRGRIKRVFMQGQPESRMVPA
DLDKWYVRNAQGQMVPFSAFGRAEWQFGSPRLERFNGIPSREIQGGPAPGFTTGQAMDEM
ERLMRQLPPGFGHEWSGISFQERQSSGQAPALYAISLIVVFLCLAALYESWSIPTAVMLA
VPLGVLGAVVASLMKGMANDVYFQVGLLATIGLTAKNAILIVEFAREGFDRGLSLMEAAT
EAARQRLRPIIMTSLAFTLGVVPLAISSGAGSGAQNAIGVGVIGGVVAGTVLAVLFVPLF
FVLVLRLFRARSAADKTVPVSMPARAEPHPGE
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtttttcatcgaccgcccggtcttcgcctgggtcatcgccatcggcatcatg
ctggccggcgcactggcgctgcgcggaatggccgtctcgcaatatccggccatcgcgccg
cccaccatcgcgatcaacgtgaccttccccggcgcctcggccgagacggtgcaggcgacg
gtggtgcaggtgatcgagcagcagctcaccggcatcgacaacctgctgtttttcgacagc
cagacgacgaaggacggccaggcgcgcatccagctcaccttcgcgcccggcaccaatgcc
gatacggcgcaggtgcaggtgcagaaccgtgtgcagctcgccgtgccccgcctgccgcag
acggtgcagcagcagggcctccgcgtcgtaaagtccgccggcaattggatgctgatcgtg
ggtttctacaccaccgataatagcatggagcgcctcgacatcaccgacttcctggcggcg
aacgtccaggacccgatcagccgcacgccaggggtgggcgatttccaggtcttcggcgcg
caattcgccatgcggatctggctcgatcccgcgaagctcatcaatttcggcctgacgccc
gcggacgtcgctgccgcggtgcgggcgcagaacgtccaggtttcgagcggcgagatgggt
ggcctgccggccgtgcccgggcagcagctcaacgccaccatcatcggcccctcctatctg
cagacggtcgaggaattcggcgccatcctgatgcgcgtgcgcgccgatggctcccaggtg
cggctgcgggatgtggcgcggctggagatcggcggcgagaactacgccatctccacccag
ctcgatggccgcatctcgagcggtatcggcatccggctcgccagcggcgccaacgcgctg
gatacggcggcggcggtgcgagccacgattgacagcctgcgcccgagcttcccgcccggc
ctcgaggttacctatctgcaggacacgactcccttcgtgcagcgctccatcaagagcgtg
atcatgacgctgatcgaggcggtggctctcgtcttcctcgtcatgctcctcttcctgcaa
aacctgcgcgcgaccctgatcccgaccatggcgatcccggtggtgctgctcggcaccttc
gcggtgctctcggcgctgggcttcagcatcaacacgctcaccctgttcggcatcgtgctg
gccatcggcctcctggtggatgacgcgatcgtggtggtggagaatgtcgagcgcgtgatg
gcggaggagcatctctcgccgctcgaagccacgcggaaatccatggaccagatcaccggc
gcgctgatcggcatcggcctggtgctctcggccgtcttcctgcccatggccttcttcggt
ggctcggtcggcgtgatctaccggcagttctcggtgaccatcgccaccgccatggggctt
tccgtgctggtcgcgatcttcttcacgccggtgctctgcgccacgatgctgaagccgcac
aagccgggacaggggacgcgcggcttctatggctggttcaaccgcggattcgaccgcacg
acgaatggctatctctggggcgtgcgcgccagcctgcgccggccagcgcgcatgctgatg
gtctatgcggcgctgctcggagcgctcggctatgccttcctgcgcctgcccggcggcttc
ctgccgaacgaggaccagggcatcgccttcgtgcaggtgaccgccccccctggtgcgacg
gccgaccgcacgcagcgcgcgctggacgaggtgggccgctacctgcgcgaggaggaggcc
ggcgtggtggacagccttttcgccatcaatggcttcagcttcggtgggcgggggcaggct
tccggccttggcttcatcaccctgaaggactgggatctgcggccgggccgcgagaattcg
gtgggggcgctgacggagcgcatcaaccgccgcttcggcacctaccaggacgcgctgatc
aacgcctcctcgccgcctgccatccgcgaactcggcaacgcgaccggcttctccttccag
ctgctggaccgcggtgcgcagggccatgcggcgctgatggaggcgcgggaccagctgttg
cgcctggcccaggccagccccatcctctcccgcgtgcggcccaacgggctgaatgacgag
gcgcagttccgcctcatcatcgactgggagcgtgcgagcgcgctgggcctcaccatcacc
gacatcaaccagacgctctccactgcctggggcgccacctacgtcaatgacttcatggac
cgtgggcgcatcaagcgcgtcttcatgcagggccagcccgagtcgcgcatggtcccggcc
gacctcgacaaatggtatgtccgcaacgcgcagggccagatggtgcccttctcggccttt
ggccgcgccgaatggcaattcggttcgccgcggctcgagcgcttcaacggcatcccctcg
cgcgagatccagggtgggccggcgccgggcttcaccaccggccaggcgatggatgagatg
gagcgcctgatgcggcaattgccgcctggcttcgggcatgaatggagcggcatctccttc
caggagcggcaatcctcgggccaggcgccggcgctctatgcgatctcgctcatcgtggtc
ttcctctgcctcgcggccctttatgagagctggtccattcccacggcggtcatgctggcc
gtaccgctcggcgtattgggcgccgtcgtcgcctcgctcatgaagggcatggcgaatgac
gtgtatttccaggtggggctgctggcgacgatcgggcttacggcgaagaacgccatcctg
atcgtggagttcgcacgcgagggcttcgaccgcggcctttcgctgatggaggccgcgacc
gaggccgcccgccagcgcctgcgccccatcatcatgacctcgctcgccttcacgctgggc
gtcgtgccgctggcgatttccagcggcgctggctcgggcgcgcagaacgcgatcggcgtc
ggcgtgatcggcggcgtggtcgcgggcacggtgctggcggtgctcttcgtgccgctcttc
ttcgtgctggtgttgcgcctgttccgcgcccgctccgcggccgacaagacggttcccgtc
agcatgccggcgcgggccgagccgcaccccggtgagtga
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