Candidate division SR1 bacterium Aalborg_AAW-1: XF24_00156
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Entry
XF24_00156 CDS
T04487
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srg
Candidate division SR1 bacterium Aalborg_AAW-1
Pathway
srg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XF24_00156 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srg03400
]
XF24_00156 (nth)
Enzymes [BR:
srg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XF24_00156 (nth)
DNA repair and recombination proteins [BR:
srg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XF24_00156 (nth)
Prokaryotic type
XF24_00156 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
DUF7178
Motif
Other DBs
NCBI-ProteinID:
AKH32521
UniProt:
A0A288GTS4
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All DBs
Position
156123..156770
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AA seq
215 aa
AA seq
DB search
MQKKNIDIFFTTLQKLYPENRTDLIWKTPWQLLVAVVMSAQTTDKQVNNVTKHFFDNIQT
PYDTLQLSLEQRSQLIKGVNYAPTKARNLYTTAQMLTEGRTHPNYHIPDTLSDLIKLSGV
GEKTAKVILHVLYNTNDIAVDTHVHRVMNRIGLVNTASPIQTSKIIDNAIPKRYAYIAHH
TLIFFGRYHCLARKPKCESCPFTSFCRYYKNNINS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaaaatattgatattttctttactacattacaaaaactctatccagaaaat
cgtactgatctcatctggaaaactccttggcaactcctcgtggctgtcgtaatgtctgct
caaacaacagataaacaagttaacaatgttaccaagcattttttcgataatatacaaaca
ccttatgatactctacaactctcactagagcaacgatctcaactcatcaaatgagtcaac
tatgctccaacgaaagctagaaatctctatacaacagctcaaatgctgactgaaggtcgt
acacatccgaactatcacataccggatactctgtcagatctcatcaaactttcctgagtt
ggagagaagacagcaaaagttatccttcatgtcttatataacaccaatgacattgccgta
gatactcatgtacatcgtgtcatgaataggattggactcgtaaatacagcatcaccaatt
caaacatcaaaaatcattgataatgctataccaaaacgttatgcttatatagcacatcac
acgttgatcttcttcggacgttatcattgtcttgctcgtaaacccaaatgcgaatcatgt
ccctttacttcgttctgtagatattacaaaaacaatataaattcttaa
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