Stenotrophomonas rhizophila: BAY15_0799
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Entry
BAY15_0799 CDS
T04500
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh00300
Lysine biosynthesis
srh00550
Peptidoglycan biosynthesis
srh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAY15_0799
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BAY15_0799
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srh01011
]
BAY15_0799
Enzymes [BR:
srh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BAY15_0799
Peptidoglycan biosynthesis and degradation proteins [BR:
srh01011
]
Precursor biosynthesis
Amino acid ligase
BAY15_0799
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AOA71233
LinkDB
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Position
935663..937141
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AA seq
492 aa
AA seq
DB search
MSQMMLLSQLLPDVVLSHDPSITGLVLDSRAVRPGNAFVAIAGFGAHGLGFVDQARAAGA
AAILFEPPAPAELPAPADAIAVPGLRTRMGAMADQFHGQPSRAMTMVGVTGTNGKTSTVQ
LLAQAWHLLGTASGSIGTLGVGLYGDVVPTGFTTPLVLQMHEVLAQLRDQGARAVAMEVS
SHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMAQYGAAKAKLFHRAGLKAAVVNLDDSF
GSEMLRTVDAGVARIGVSSRGAQQATLRADSLKLDGRGIAFDLVVDGARHPVQSPLLGRF
NVDNLLAVAGVLHALGHAPEAIAALVSQLQPIAGRMNRLGGERGLPTVVVDYAHTPDALE
QALQSLQGHLQGRLFCVFGCGGERDAGKRPQMAAIAERLAQQVIVTDDNPRGEDGDAIVA
DILAGFTAPDAVTVQRNRARAIGLAVKLAGPGDIVLLAGKGHEPYQEVRGVKHDFDDTLV
AAAALSAKEAIL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatgatgttgctttcgcagttgcttcccgatgtggtgctgagccacgacccc
tccatcaccggcctggtgctggacagccgcgcggtgcgccccggtaatgcctttgtcgcg
atcgccggcttcggcgcgcacgggctgggctttgtcgaccaggcccgcgccgccggtgcg
gccgcgatcctgttcgaaccgccggccccggcggagctgccggcaccggccgatgccatt
gccgtgccgggcctgcgcacgcgcatgggcgccatggccgaccagttccatggccagccc
tcgcgcgcgatgaccatggtcggcgtgaccggcaccaacggaaaaacctccaccgtgcag
ctgctggcccaggcctggcacctgctcggcaccgccagtggcagcatcggcaccttgggc
gtgggtctgtacggcgatgtggtgccgaccggcttcaccacgccgctggtgctgcagatg
catgaagtgctggcgcagctgcgtgaccagggcgccagggcggtggccatggaagtgagc
tcgcatgcgctcgaccagggccgcgtggatgccgtgcactacgacgtggcggtgttcacc
aacctcacccgcgaccatctcgattaccacggcgacatggcgcagtacggcgcggccaag
gccaagctgttccaccgtgccggcctgaaggccgcggtggtgaacctggatgacagcttc
ggcagcgaaatgctgcgcacggtcgatgccggcgtcgcccggatcggggtcagctcgcgc
ggtgcgcagcaggccacgctgcgcgccgactcgctcaagctcgatggccgtggcatcgcc
ttcgacctggtggtcgacggtgcacgccacccggtgcagtcgccgctgctgggccgcttc
aacgtggacaacctgctggccgtggccggtgtgctgcatgcgctgggccatgcccccgag
gcgatcgccgcgctggtgtcgcagctgcagccgatcgccgggcgcatgaaccgcctcggc
ggcgaacgcggcctgccgaccgtggtggtcgattacgcgcatacccccgatgcattggag
caggccctgcagagcctgcagggccacctgcagggcaggctgttctgcgtgttcggctgc
ggcggcgaacgcgacgcgggcaagcgcccgcagatggcggccatcgccgaacgcctggcc
cagcaggtgatcgtcaccgacgacaacccgcgcggcgaggatggtgacgccatcgtcgcc
gacatcctggctggtttcactgcccccgacgcggtcaccgtgcagcgcaaccgcgcgcgc
gcgatcggcctggcggtgaagctggccggccctggcgacatcgtgctgctggccggcaag
ggccatgagccctatcaggaagtgcgcggggtcaagcacgacttcgacgacaccctggtg
gccgctgccgcgctcagcgccaaggaggccatcctgtga
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