Stenotrophomonas rhizophila: BAY15_2331 Help Entry BAY15_2331        CDS       T04500                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism srh  Stenotrophomonas rhizophila Pathway srh03030   DNA replication srh03410   Base excision repair srh03420   Nucleotide excision repair srh03430   Mismatch repair Brite KEGG Orthology (KO) [BR:srh00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BAY15_2331    03410 Base excision repair     BAY15_2331    03420 Nucleotide excision repair     BAY15_2331    03430 Mismatch repair     BAY15_2331  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:srh03032]     BAY15_2331    03400 DNA repair and recombination proteins [BR:srh03400]     BAY15_2331 Enzymes [BR:srh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BAY15_2331 DNA replication proteins [BR:srh03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BAY15_2331 DNA repair and recombination proteins [BR:srh03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BAY15_2331    NER (nucleotide excision repair)     GGR (global genome repair) factors      BAY15_2331    MMR (mismatch excision repair)     DNA ligase      BAY15_2331   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BAY15_2331 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD HHH_5 PTCB-BRCT Bep_C_terminal Motif Other DBs NCBI-ProteinID:  AOA72765 UniProt:  A0A1B2N5I4 LinkDB All DBs Position complement(2665978..2668440) Genome browser AA seq 820 aa AA seqDB search MSPSPAQRAEILRRQIDEAGKAYYDRDEQLIPDAEYDRLVRELEALEQAHPELVNADSPT QRVGGKAASRFAEVRHAVPMLSLGNAFSDEEVQDFVRRISERLRRDTVRFSAEPKLDGLA ISLRYEDGRFVQGATRGDGTTGEDVSANLRQIKVIPHTLQGSGWPQVLEVRGEVYMARAD FEAYNADARLHEGKVLANPRNAAAGSLRQLDPKMSARRKLSFYAYGTGEVRGGELPPTHS ATLAQLKGWGFPVSELCQVVEGSEGLLAYYRDIGERRDGLAFDIDGVVYKLDDRAGQEQM GFVSRAPRWAIAHKFPAQEQTTTVEAIEIQIGRTGAATPVARLHPVAVAGVIVSNATLHN ADQIERLDVRVGDTVIVRRAGDVIPEVVSVIADRRPAGTSPWRMPTQCPVCGSEIVREEG AAAWRCSGELSCPAQRKEAIAHFASRRAMDIDGLGGKYIETLVDAGIVRGVADLYRITRD QLLQLKLVLDAESPQALANQIGLHLPPEGSGQYLREVLALDATDDSWRARALALEATFSW NTKKIATKWADNLIAAIDASRTTTLERLLFALGIEHVGESTAKALATWFGDLELIRHLPW PLFKRVPDIGGEVARSLGHFFEQPGNQEAIDALLQVGQVRISDAHPPSAKLRDGLDFAQL LVEAEIPGITRLRAEKLAAMLPDAASVLDAEPVQLVAAGLPNEVALGVADWLDREGHGPM LLKADAYLRTLLERAPEAASQSEGPLEGQTVVLTGTLAQMTRDEAKERLEALGAKVAGSV SKKTSFVVAGTEAGSKLTKATELGIDVWDEDRLVAFLAAH NT seq 2463 nt NT seq  +upstreamnt  +downstreamnt atgagtcccagtcccgcccaacgtgccgagatcctgcgccgccagatcgacgaggccggc aaggcttactacgaccgcgatgagcagctgattcccgacgccgagtacgaccgcctggtg cgcgaactcgaagcgctggaacaggcccacccggagctggtcaatgccgattcgcccacg cagcgggtcggtggcaaggcggcctcgcgctttgccgaggtgcgccatgcagtgccgatg ctgtcgctgggcaacgccttcagcgatgaggaagtgcaggatttcgtgcgccgcatcagt gagcgcctgcgccgcgacaccgtgcgcttctcggccgaacccaagctcgatggcttggcc atcagcctgcgttacgaagacggccgcttcgtgcagggcgccacccgtggcgacggcacc acgggtgaggacgtcagcgccaacctgcgccagatcaaggtgatcccacacacgctgcag ggcagtggctggccgcaggtgctggaagtgcgtggcgaggtgtacatggcccgcgccgat ttcgaggcctacaacgccgatgcgcgcctgcacgaaggcaaggtgctggccaacccgcgc aacgccgccgccggctcgctgcgccagctcgatccgaagatgagcgcgcggcgcaagctg agcttctatgcctacggcaccggcgaagtgcggggcggtgaactgccgccgacccattcg gccacgctggcccagctcaaggggtggggtttcccggtcagcgagctgtgccaggtggtg gagggcagcgagggcctgctcgcctattaccgtgacatcggcgaacgccgcgatggcctg gccttcgatatcgacggcgtggtctacaagcttgacgatcgtgccgggcaggaacagatg ggctttgtgtcgcgcgctccgcgctgggccatcgcgcacaagttcccggcgcaggagcag accaccacggtggaggcgatcgaaatccagatcggccgtaccggcgcggccacccccgtg gcgcgcctgcacccggttgccgtggccggggtgatcgtgtccaacgccaccctgcacaac gccgaccagatcgagcggctggacgtgcgcgtgggcgatacggtgatcgtacgccgcgcc ggcgatgtcattcccgaagtggtcagcgtcatcgccgaccgccgcccggcgggtacctcg ccgtggcgcatgccgacccagtgcccggtatgtggctcggagatcgtgcgtgaggagggc gcggccgcctggcgctgctcgggcgagctcagctgcccggcgcagcgcaaggaagccatc gcgcacttcgcctcgcgccgcgcgatggatatcgacggactgggtggcaagtacattgaa accctggtcgatgccggcatcgtgcggggcgtggccgacctctaccggatcacccgcgac cagctgctgcagttgaagctggtgctggacgccgaatcgccgcaggcattggccaaccag atcggcctgcacctgccgcccgaaggcagtggccagtacctgcgcgaggtgttggcgctg gatgccaccgacgacagctggcgcgcccgtgcccttgccctggaagcgaccttcagttgg aacacgaagaagatcgccaccaagtgggccgacaacctgatcgccgcgatcgacgccagc cgcaccaccacgctggaacggctgctgttcgcgctgggcatcgaacacgtaggcgaaagc acggccaaggcgctggccacctggttcggtgacctggaactcatccgccacctgccgtgg ccgctgttcaagcgcgtgccggacatcggcggtgaagtggcgcgctcgctcggccacttc ttcgagcagccgggcaaccaggaggccatcgacgccctgctgcaggtcgggcaggtgcgc atcagcgacgcccatccgcccagcgccaagctgcgcgacgggctggacttcgcgcagctg ctggtcgaggccgaaatccccgggatcacccgcctgcgcgcggagaaactggccgccatg ctgcccgatgccgccagcgtgctggatgccgaaccggtgcagctggttgctgccggcctg cccaatgaagtggcgctgggcgtggctgactggctcgaccgcgaagggcatgggccgatg ctgctcaaggccgatgcgtacctgcgcaccttgctggagcgcgcccctgaggccgcctcc cagagcgaaggaccgcttgagggccagaccgtggtgttgaccggcacgctcgcccagatg acccgcgacgaagccaaggagcgcctggaagcgctgggcgccaaagtcgccggcagcgtc tcgaaaaagacctcgttcgtcgtcgccggcaccgaggcaggctccaaactcaccaaggcc accgaactgggcatcgatgtctgggatgaagaccgcctggtcgcgttcctggcggcccac tga

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