Spirosoma rhododendri: HH216_10105
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Entry
HH216_10105 CDS
T08048
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_10105
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_10105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_10105
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_10105
Transporters [BR:
srho02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HH216_10105
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HH216_10105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Insulin_TMD
Motif
Other DBs
NCBI-ProteinID:
QJD78741
UniProt:
A0A7L5DMN4
LinkDB
All DBs
Position
complement(2400862..2404011)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSVTEIAIKRPTLVVVAFTVLGLLGFISYKSLNYTLLPKFDASVVTILTTYPGAAAGEVE
NSVTRKLEDAVSSIENLKNISSTSQEGLSTIQVELNASADPNQALEDAQRKINAVLSQLP
DEVNSPTLLKFSTDDLPVLRMGVRANLEPTKLYDLVDDQIRTQLTKVDGVGQVTLTGGRE
REIRIGIDPNKLKNFNLSVAQVSQAINSANLDYPTGKIETDRAQYAIRLSGKFTNVDQIR
NAALKTSPDGTKILLSDVATVTDGVADATTINRINGRESVGVTIQKQTDANAVEISQRVR
AILGNIEKQYANVGLKFEITSDSSTYTLASAEGVIFDLEFAVVLVALVMLLFLHSLRNAF
IVMVSVPASIISVFVPMYLLGFTLNLMTLMALSLVVGILVDDSIVVLENIYRHLEMGKNR
RQASLDGRNEIGFTAVAITMVDVVVFLPLVFVQGLIANIIREFSLVVVFSTLMSLIVSFT
ITPLLASRFAKETDLNGPGLGKRFLKGFEHQFDSLKNGYARLLQWGLFHKRWVYLAAIAL
FIGSIGLVAGGFIGTTFFPQSDQGEFIIQVEGEPFNSLAETNRICQQIEKELMNTKYVTK
VNSNVGYSSSSQGGGLGSTPYHKAEITVTIVPKDQRPVSIETFAAQQKAKIMQIPGLNVK
SAPVGITGGANATPIQILLQGNTQQELEASAAIVKKVVASVSGTTDVELSVDDPKPELKV
NLDRRKMAQYGVSVANVGATLQTAFSGNTDSKYRIGNRDYDIRVELNQFNRQSKDDVGNL
TVPDAQGNLIEVDQIADLTLGTGATQLSRYNRVGSLSVNANVVGRPVGTVGTEIDNILKK
TELPGGVTYALKGDLERQADAFGSLGIALGLAITFVYLLMVALYNSYFRPFVVLFSIPMA
VIGAFLALALARESISFFVMLGMIMLIGLVAKNAILLVDFANAQKEEGKSTVEALIEAGR
ERIRPILMTTIAMAIGLLPMALATGDGSESKNGLAWVIIGGLISSLLLTLVLVPTVYLTF
ENGFNAASRAWNRISGKKSKPVTRESAEV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacagaaattgccattaaacgcccgacactggtggtggtggcctttaccgtg
ctgggtctgctggggttcatctcgtacaagagtttgaactataccctgctgcctaagttc
gatgcgtccgtcgtgacgattctgacgacgtatccgggcgcagcagccggggaggtggaa
aactccgtgacgcgcaaactcgaagacgctgtgtcgtcgatcgagaacctgaaaaacatt
agctcgaccagtcaggaaggtttgtctacgattcaggttgaactcaacgccagcgccgac
ccaaaccaggcactggaagacgcccagcggaaaatcaacgccgtactatcgcagttgccc
gacgaagtcaactcgccgacgctgctcaaattctcgaccgacgatctgcccgttttgcgg
atgggcgtgcgggccaacctcgaaccgaccaaactctacgacctcgtcgatgaccagatt
cgaacgcagctgaccaaagtcgacggtgtggggcaggtgacgctgacgggtggccgcgaa
cgcgaaatccgcatcggtatcgaccccaacaagctgaagaacttcaacctgtcggttgcg
caggtgtcgcaggctatcaactcggccaacctcgactacccaaccggcaagatcgaaacc
gaccgcgcgcagtacgccatccggctgtcgggtaagtttaccaatgtcgaccagattcgg
aacgcggccctgaaaacctcgcccgacggtaccaaaattctgcttagcgatgtagcaacc
gtcaccgacggggtggccgacgcaacgacgatcaaccggatcaacggccgcgaatcggtc
ggggtaacgattcagaagcagaccgacgccaacgccgttgagatcagtcagcgggtgcgg
gcgattctgggcaacatcgaaaagcagtacgccaacgtcggcctgaagttcgagatcacc
agcgactcctcgacctacacgctggcatcggccgaaggcgtaatcttcgaccttgaattt
gccgttgtgctggtggcgctcgtgatgctgctgtttctgcacagcctgcgcaatgccttt
atcgtgatggtatcggttccggcgtcgattatctcggtattcgtgccaatgtatctgctg
ggcttcacgctgaacctgatgacgctgatggccctctcgctggttgtcggtattctggtc
gacgactcgattgtggtcctggaaaacatctaccggcacctcgaaatgggtaaaaaccgc
cgtcaggcatcgctcgacggtcggaacgagattggttttacagccgtcgccattacgatg
gtcgacgtggtagtattcctgccgctggtcttcgtacagggtctgatcgccaacattatc
cgcgagttctcgctggttgtcgtgttctcgacgctgatgtcgctgatcgtgtcgtttacc
attaccccactactggcgtcgcgttttgccaaggaaaccgacctcaacgggccgggtctg
ggcaagcgattcctgaaaggattcgaacatcagttcgattcactcaaaaacgggtacgcc
cgactgttgcagtggggtctgttccacaagcgttgggtttatctggccgctatcgccctg
tttatcggttcgatcggactggttgcaggtggctttatcggcaccacgttcttcccgcaa
agtgaccagggcgaatttatcattcaggtcgaaggggagccattcaacagtctggccgaa
accaaccggatttgccagcagattgagaaagagctgatgaacacgaagtatgtgacgaag
gtgaactcgaacgtcgggtattcaagctcatcgcagggcggtggcctggggtcaacgccc
taccacaaagccgagattacggtgacgattgttccgaaagatcagcgccccgtgtcgatt
gaaacgtttgcggcccaacagaaagccaagatcatgcagattcccggtctgaacgtaaaa
tcggccccggtcggtattacgggtggtgccaacgcgacgccgattcagattctgttgcag
ggaaatacgcagcaggaactggaagcatcggcggctatcgtgaagaaagttgtggcctcg
gtcagcggtacaacagacgttgaattatcggtcgatgatcctaagccggagctgaaagtg
aatctggaccgccggaaaatggcgcagtacggcgtatccgtcgcgaacgtcggtgccacg
ctgcaaacggccttctcgggtaataccgacagcaaataccgtatcggcaatcgtgactac
gatatccgcgttgagctgaatcagttcaaccggcagagcaaggacgacgtaggtaacctg
accgttcccgacgcgcagggcaacctgatcgaagtcgaccagattgccgacctgacgctg
ggcacgggtgctacgcagctatcgcgctacaaccgggtcgggtcgctgtcggtcaatgcc
aacgtcgttggtcggccggtgggtacggtcggtacggagatcgacaatattttgaagaaa
acggaattgccgggtggtgtcacatatgcactcaaaggcgatctggaacggcaggccgac
gcgtttggtagcctaggtatcgcgctggggctggctatcacgtttgtgtacctgctgatg
gttgcgctatacaactcgtatttccgcccgttcgtcgtcctgttctcaattccgatggcc
gtaatcggtgcgtttctggcgctggcactggcccgcgaatcgatctcgttcttcgttatg
ctcggtatgattatgctgatcggtctggtagcgaaaaacgctatcctgctggtcgacttt
gccaatgcgcagaaggaagaaggcaagagcacggtcgaagcactgatcgaagcgggccgc
gaacggattcgcccgatcctgatgaccacgatcgccatggcgattggtctgctgccgatg
gcactggccaccggcgacggttcggaatcgaaaaacggtctggcgtgggttatcatcggt
ggtctgatcagttcgctgctgctgacgctggtcctcgtcccgacggtgtacctgacgttt
gagaacggtttcaacgcagcaagccgcgcctggaaccggatttcgggcaagaaaagcaaa
cccgtcacccgcgaatcggcagaagtatag
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