Spirosoma rhododendri: HH216_10110
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Entry
HH216_10110 CDS
T08048
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_10110
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_10110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srho03036
]
HH216_10110
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_10110
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_10110
Chromosome and associated proteins [BR:
srho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HH216_10110
Transporters [BR:
srho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HH216_10110
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HH216_10110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
DUF6568
DUF1433
SHOCT
Motif
Other DBs
NCBI-ProteinID:
QJD78742
UniProt:
A0A7L5DMI2
LinkDB
All DBs
Position
complement(2404116..2405186)
Genome browser
AA seq
356 aa
AA seq
DB search
MKRILIVLGVVALIGLIAFRLIDNKKVIDDAKTPKAVFQTTPVVEVQAVTFEKLDQNLSL
LGTVEARNEGNIIAETRGKLTGFNLVLGTQVGKGQRVGYIQDEVQGIVLQNSQTAVDNAK
REMERYERLYQGGAVTQEAYQKLKDQYNNTLISEKQQKRVLGNGAVVAPISGYVYDKKVE
NGEYVQVGAVLASVINLNQLKLVVNVPEQAVYQLKIGDQARVTAQAFPGVVFTGAVHYIS
PKGDALHNYPVEVYLNNNAKNQLKAGTLANASFTFKQGVNGLFIPRRALVGGADSASVYV
VQNDIARLRRVKLGYDNGDQYQVLDGLQQGEPIVVNGQLNLTNGSKVTVSNSTASR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaattcttatagtactcggtgtcgttgcgctgatcgggctgattgccttccgg
ttgatcgacaacaaaaaagtgatcgacgacgccaagacgccgaaagctgtattccagacc
acaccggttgtggaagtgcaggccgtgacgtttgaaaagctcgaccagaacctgtcttta
ctcggtacggtcgaagcccggaacgagggaaacatcatcgccgaaacgcggggtaagctg
accggcttcaacctggtgctgggcacgcaggtcggcaaggggcagcgcgttggctatatt
caggatgaagtacagggcattgtcctgcagaatagccagaccgccgtcgataatgccaaa
cgcgagatggagcggtacgagcggctgtatcagggcggtgccgtaacgcaggaagcttat
cagaagctaaaagatcagtacaacaacacgctgatcagtgaaaagcagcagaagcgggtg
ctgggcaacggcgcggtagtagcccccatcagcgggtatgtctacgacaagaaagtggag
aacggcgagtacgtacaggtcggtgccgtgctggcgtcggttatcaacctgaatcagttg
aagttggtcgtcaacgttccggagcaggctgtctatcagttgaaaatcggcgatcaggcc
cgtgtaacggcgcaggcatttcccggtgttgtcttcacgggtgccgtgcattacatcagc
cccaagggcgacgcgctgcacaactatccggtggaagtgtacctaaataacaatgccaaa
aaccaattgaaagccggtacgctggccaacgccagcttcacgtttaagcagggcgtcaat
gggttgttcattccccgacgggcgttggttggcggtgccgacagcgccagcgtttacgtc
gtacaaaacgatattgcccggctgcgtcgggtaaaactcggctacgacaacggcgatcag
tatcaggtactcgacggtctgcaacagggtgaacccatcgtggtcaacggccagctcaac
ctcaccaacggctcgaaagtaacggtcagcaactcaacggcaagccggtaa
DBGET
integrated database retrieval system
