Spirosoma rhododendri: HH216_16085
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Entry
HH216_16085 CDS
T08048
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_16085
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_16085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_16085
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_16085
Transporters [BR:
srho02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HH216_16085
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HH216_16085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QJD79768
UniProt:
A0A7L5DT51
LinkDB
All DBs
Position
3874219..3877383
Genome browser
AA seq
1054 aa
AA seq
DB search
MFTKFIKRPVFAIVISVMIVFVGVLAIKKLPISQFPDIAPTTVNIFIDYPGSSADVLVKS
TLITLEQALNGVQDMRYIATDATSAGEATLRIIFEPGTDPNDAVVRVKTRVDQVMPLLPE
LVQREGVIITPIQPSMLMYVNLFSTAKNIDEKFLFNYATVKMIPEIQRTKGIARAQILGS
RRYAMRVWLNPDRMRAYNISVEEVMKAMGEQSIIGRPGRLGQSSGIAAQSLEYVLTYKGR
YSDPKEYEGIIIRANSAGESIHLRDIARVELGSEFVNIYSNLDGHPSAAIVLRQNYGSNA
SDVIDEVKEKLEVMKESFPPGVDYKISYDVSNFLDASIEQVIDTLRDAFILVALVVFLFL
GDWRSTLIPILAVPVSLIGAFFVIQAFGLSINLITLFALVLAIGIVVDDAIVVVEAVHAK
MEEKPYLTPFGAVKQVLGEISGAIIAITLVMVSVFLPISFMTGPVGTFYRQFSITMASSI
VISALIALTLTPVLCAMLLKNHHGHPPKKNLLTRAIDGFNRRFDKLTGWYVGILKLIVSR
RVLTFLILGGFCVGIFLENQVLPAGFIPNEDQSTIYAIIQTPPGSTLEQTNQVSRRLQKI
CEEVPGIESVSSLAGYEIMTEGRGSNAGTCLINLKTWSQRDKNVKEIMEELEGKTRNLGA
TIEFFEPPAIPGFGTSGGFSMRLLDKNTDTDYSEFDKINKEFMANLAKRPELTGLFTFFA
ANYPQYELEIDNQLAMQKGVSIGKAMDNLNILIGSTYEQGFIKYNQFFKVYVQSDPSFRR
LPSDLLNLFVKNDEGEMVPYSAFMKLKKGQGPNEITRFNLYNSSAIQGLPAKGYTTADAI
AAIREVAAKTLPKGYDVAFEGLSYDESIRGNESLVVFLIVIAFVYMVLAAQYESFIIPLA
VLFSLPVGIFGSFFTLQLLGLENNIYAQIGLIMLIGLLGKNAVLIVEFAVQKRAEGATIL
NAAIEGAKVRFRPILMTSFAFVAGLIPLIIATGAGAIGNRTIGASALGGMLFGTIFGVVI
IPGLYYIFAHLADGRKLIRGEEEMPLTEEIEHHV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaaaattcatcaaacgacccgtattcgcgatcgtgatctcggtcatgatcgtc
tttgtcggggtgctggcgatcaagaaactgccgatttcgcagtttcccgacattgccccc
accacggtcaacatcttcattgactatcccggatcgagcgccgacgtactggttaaatcg
acgctgattacgctggagcaggccctcaacggggtgcaggatatgcgctacatcgctacc
gacgccaccagtgccggtgaagccaccctccggatcatcttcgaacccggcaccgacccc
aacgacgccgtcgttcgggtaaaaacgcgtgtcgaccaggtgatgccgctgctgcccgaa
ctggtacagcgcgaaggggttatcatcaccccgattcagccgagtatgctgatgtacgtc
aacctcttctcgacggccaagaacatcgacgaaaagttcctgttcaactacgccacggtg
aagatgatccccgaaatccagcggacgaagggtattgcgcgggcgcagattctgggtagc
cgccggtacgctatgcgcgtatggctgaaccccgaccggatgcgggcctacaacatttcc
gtggaggaagtgatgaaggcaatgggcgaacaaagcatcattgggcggccgggccgactc
gggcaaagctccggtatcgcggctcagtcgctggaatacgtactgacctacaagggccgg
tatagcgacccgaaagagtacgaaggcattattatccgggccaactcggcgggggaaagc
attcacctgcgcgacattgcccgcgtcgaactgggtagcgaattcgtcaacatctactcc
aacctcgacggccacccgtcggcggctatcgtcctgcggcagaactacggcagtaacgcc
agcgacgtaatcgacgaagtaaaagagaagctggaagtgatgaaagagtcgttcccgccg
ggtgtcgactacaaaatcagctacgacgtatcgaacttcctagacgcgtcgatcgagcag
gttatcgatacgctgcgcgacgcctttatcctggtggccctcgtcgtgttcctgttcctg
ggcgactggcggtcgacgctcatcccgattctggcggtgccggtgtcgctgattggtgcc
ttcttcgtgattcaggcgttcggtttgtccatcaacctgattacgctcttcgcccttgta
ctggctatcggtatcgtggtcgatgatgccattgtggtggtcgaggccgtgcacgccaag
atggaggaaaagccgtatctgacgccctttggggccgttaagcaggtgctgggcgaaatc
agcggagccattatcgccatcacgctcgtcatggtgtcggtattcctgccgatctcgttc
atgaccggcccggtcggtacgttctaccggcagttctcgatcacaatggccagttcgatc
gttatctcggccctgatcgccctgacgctgacgcccgtactgtgcgccatgctgctgaaa
aatcaccacggccatccgccgaagaaaaacctgctgacccgcgccatcgatggcttcaac
cggcgattcgacaagctgaccggctggtatgtgggtattctgaagctgatcgtgagccgg
cgcgtgctgacgttcctgattctgggcggcttctgcgtgggtattttcctcgaaaaccag
gtgctgccagcgggtttcatcccgaacgaagaccagagtacgatctacgccatcatccag
accccgccgggctcgacgctggagcagaccaaccaggtatcacggcggttgcagaagatt
tgcgaagaagtgccgggtatcgagtccgtatcgtcgctggcgggttacgagatcatgacc
gagggtcggggttccaacgccggtacctgtctgatcaacctcaaaacgtggtcgcagcgg
gataagaacgtgaaagagatcatggaagagctggaaggcaaaacccgtaatctgggcgcg
accatcgagttcttcgagccaccggccattcccggctttggtacatccggcggtttctcg
atgcgtctgctcgacaaaaacacggataccgactacagcgagttcgacaagatcaacaag
gagttcatggctaacctggccaagcgccccgagctgacgggtctgttcaccttcttcgcg
gccaactatccgcagtacgaactggaaatcgacaaccagctggcgatgcagaaaggcgtg
tcgatcggtaaggcgatggacaacctgaacatcctgatcggtagtacctacgagcaaggg
tttatcaagtacaaccagttcttcaaggtatatgtgcagtcggaccccagtttccgccgg
ttaccgtctgacctgctgaacctgttcgtgaaaaacgacgagggtgaaatggtgccgtac
tcggcctttatgaagctgaagaaagggcagggaccaaacgagattacccggttcaacctg
tacaactcgtcggctattcagggtttgcccgccaaaggctacaccaccgccgatgccatt
gcggccatccgggaggtagcggccaagacgctgccgaaaggctacgacgtggcttttgaa
ggcttgtcgtacgacgaatccatccggggcaacgagtcgctggttgtgttcctgatcgtg
attgccttcgtatacatggtactggcggctcagtacgaaagcttcatcattccgctggcg
gtactgttctcgctgccggtcgggatcttcggttcgttcttcacgctgcaactgctgggg
ctggaaaacaacatctacgcccagatcggtctgatcatgcttatcggtctgctcggtaaa
aacgccgtactgatcgtggaattcgccgtgcagaaacgagcggagggggccacgattctc
aacgcagctatcgaaggggcaaaggttcgttttcgcccgattctgatgacctcgtttgcc
ttcgtcgccggtctgattccgctgattatcgcgacgggtgccggggccatcggtaaccgg
accatcggggcgtcggcgctggggggtatgttgttcggtaccatttttggggtcgtcatc
atccccggtctgtactacatattcgcccacctggccgacggccggaagctgatccggggt
gaagaagaaatgccattaactgaagaaatcgagcaccatgtttaa
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