Spirosoma rhododendri: HH216_17965
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Entry
HH216_17965 CDS
T08048
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_17965
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_17965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srho03036
]
HH216_17965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_17965
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_17965
Chromosome and associated proteins [BR:
srho03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HH216_17965
Transporters [BR:
srho02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HH216_17965
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HH216_17965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
RND-MFP_C
BSH_CzcB
HH_MFP_RND
BSH_CusB
CzcB_C
Beta-barrel_RND
BSH_LcnD
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QJD80086
UniProt:
A0A7L5DNV9
LinkDB
All DBs
Position
4314633..4315766
Genome browser
AA seq
377 aa
AA seq
DB search
MKRWIAIGLVVLVLGGIIVYNKVLHPAPGSSPGGGGGGDKKGAPGKEGGAGKGPTPAVNA
YVVRAQDIKENVITSGSLLAAEQVDIYPEISARITQLTIQEGQPVAKGQLLVKLFDADLR
AQLQKLQAQADNARRTEERNKQLLARGGISQQEYDIVTTNLRSSLADIDLVKANLQRTEI
RAPFSGIIGLRNVSSGALVSPNTLIARLQQVSSLKLDFSIPEKYGPSVRTGSLISFQVDG
SNTTNQGTVYAIEPGVEEQTRNLRIRARVANSSSRFRPGTFARVTLTVQTDNALVVPTQA
VIPQTRTNQVVVIKNGKAQFKDVTTGLRTAGSIQVLSGLTAGDTVATTGLLFLKPDAPVK
VGKTITLPGAGPKVATK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagatggattgctatcggcctcgtcgtgctagtgctcggcggaatcattgtgtac
aataaggtactgcacccggcccccggctcatcgcccggcggagggggcggtggcgacaaa
aaaggcgcacccggcaaagaggggggcgctggtaaagggcctacgccagccgtcaatgcc
tacgtcgtgcgggcgcaggacatcaaagaaaacgttatcacgagcggctcactactggcc
gctgaacaggttgatatctaccccgaaatttcggcccgtatcacacagcttaccattcag
gagggtcagcccgtcgcgaaggggcagctgctggtaaaactgttcgacgccgatttgcgg
gcgcagttgcagaagctacaagcccaggccgacaacgcccggcggaccgaagagcgaaac
aagcagctcctggcgcggggcggcatcagtcagcaggagtacgacattgtcacgaccaac
ctacgctcgtcgctggccgacatcgatctggtgaaggccaatctgcaacgtaccgagatc
cgggcacctttttcgggtatcatcggcctgcgcaacgtcagttcgggtgcactcgtatcg
cccaatacgctgatcgcgcgactgcaacaggtgtcatcgctgaaactggatttctcgatt
cccgaaaaatacggtccgtctgtcagaaccggatcgctgatttcgttccaggtcgatggc
agcaatacgaccaaccagggcacggtatatgccatcgagccgggtgtggaggagcaaacg
cgcaacctgcggatacgggcgcgggtggccaactcgtcgagccggttccggccggggacg
tttgcccgcgtaacgctgacggtacagaccgacaatgcgctggtagtaccaacgcaggcc
gtaattccgcagacacgcacgaaccaggttgtcgtcataaaaaacggcaaagcccagttt
aaagatgtaacgacgggcctacggacggccggttcgattcaggtcctgtcgggcctgacc
gctggcgataccgtcgcgacaacgggtctgctgttcctcaagcccgacgcgccggtgaaa
gtaggcaaaacgattaccctccccggcgcgggacccaaagtggcaacaaaatag
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