Shewanella rhizosphaerae: K0I63_00155
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Entry
K0I63_00155 CDS
T09262
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs01501
beta-Lactam resistance
srhs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_00155
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I63_00155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_00155
01504 Antimicrobial resistance genes [BR:
srhs01504
]
K0I63_00155
Transporters [BR:
srhs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I63_00155
Antimicrobial resistance genes [BR:
srhs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I63_00155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK12985
LinkDB
All DBs
Position
33770..36919
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIMKLPVSQYPSIAPPTVVINAIYPGASAKTMEDT
VTQVIEQRMTGIDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVKVNKSSSGFLMVLGFVSQDGSLEKNDISDYVGSNILDPMSRVPGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSLDIMASIREQNAQVSAGQLGGAPSIAGQELNATVTAQSRL
QTAEEFRKIIIKSDPSGAKVYLEDVARVELGSESYSVESFYNGRPAAGLAIKLATGANAL
ATAERVREKVDEMKPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEDGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMAL
SVLVAIILTPALCATMLKPIAKGHHAVETGFFGWFNRTFDKMTSRYEAGVAAMIKRAGRV
MLIYVALTVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQETTKKVMSKISDFYLNE
TGDSVKSVFSVSGFSFAGSGQNMGLAFVGMKDWSERTGPGQDVKSVAGRAMGMFMQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHEKLLEARNMLLGMASQNPNLVGVRPNGQE
DAPMYRIHIDHAKLRALSIDIDAVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQ
PEDLDTWYVRNSQGEMVPFSAFATGTWEYGSPRLERFNGLPAMNIQGGTAQGYSTGAAMA
DIEAMVAKLPPGFGVEWNGLSYEERLSGNQAPALYALSIMVVFLVLAALYESWSVPFAVI
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTGVLGGMMSSTFLGIFFIP
IFFVIVERIFSKREKKGAATQAADSTPQE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttttcatcgatcgccctatctttgcctgggtgattgcaattattgttatg
ttggccggggtgctctctatcatgaagcttcccgtgtcgcagtacccgagtattgcgccg
ccgaccgtggtgattaacgccatctatccgggtgcgtctgccaagaccatggaagacact
gtgacccaggtgatcgagcagcgcatgacgggtatcgaccatctgcgttacatctcgtcc
accagtgacagctttggtaacgcgcagatcaccctgacgttcaatgccgaggccgatccc
gatatcgcccaggttcaggtgcagaacaagctgcagctggcgatgccgctgctaccgcaa
gaggtgcaggcacaaggggttaaggtcaacaaatccagctcgggtttcttgatggtactg
ggcttcgtgtctcaggatggctcgctggagaagaatgatatctccgactatgtgggctct
aacatcttagaccctatgagtcgtgtgcctggtgtgggtgagatccagctgttcggtgcc
cagtacgccatgcgtatatggctagacccgctcaagctgacgcaatacaacctcaccagc
ctggacatcatggcctcgattcgtgagcagaatgctcaggtgtctgcgggtcagttgggt
ggtgcgccctctattgcgggtcaggaactcaacgccacggtaacggctcagagtcgtcta
cagacggccgaagagtttagaaagatcatcatcaagtccgatccgtcgggcgccaaggtc
tatctggaagatgtggcccgagtcgaactgggttcggaaagctattcggtagagtccttc
tataacggccgtccggctgccggtctggcgatcaagctggccactggggctaatgccctg
gcgaccgccgagcgcgtgcgtgagaaggtcgatgagatgaagcctttcttcccgcaaggg
ctggaagtggtttatccctatgacaccacccccttcgttgagaaatcgatcgagggcgta
gtgcataccctgctggaagccgtggtactggtattcgtgatcatgtatctcttcctgcag
aacttccgtgcgaccctgatcccgaccatcgcggtacctgtggtactgctggggaccttc
gccatcctgtcggctaccggcttctcgatcaacaccctgaccatgttcgccatggtattg
gccatcggtctgctggtggatgacgccatcgtggtggtagagaacgtcgagcgtgtgatg
tccgaagacggcttgagcccgatagaggccactaagaagtcgatggatcagatcaccggc
gccctggtgggtatcggtctgaccctgtcggcggtattcgtgcctatggcattcatgtcg
ggttcgaccggtgtgatctatcgtcagttctccgtgactatcgtatcggcgatggcgctt
tctgtgctggtggcgatcatcctgacgccggccctgtgtgccaccatgctgaagccgatt
gccaagggccaccatgcggtcgagacgggtttcttcggttggtttaaccgcaccttcgac
aagatgacctcgcgttacgaggctggcgtggcggcgatgatcaagcgcgccggtcgcgtc
atgttgatctacgtggccctgacggttgccgtgggttggatcttcatgcgcatgccgacc
gccttcttaccggacgaagaccagggtatcttgtttactcaggctattctgccgaccaac
tcgacccaagagacgaccaagaaggtgatgagcaagatctccgacttctatctcaacgag
acgggcgacagcgtcaagtcggtatttagcgtatcaggcttcagcttcgccggtagtggt
caaaacatgggtctggccttcgttggcatgaaagactggtctgagcgtaccggtccgggt
caagacgttaagtcggtcgccggacgtgccatgggcatgttcatgcagatgaaggaagcc
ttcgtgtttgccttcgtaccgcctgcggtgatcgagctgggtacggcaaacggtttcgat
ttctatctgcaagacagaaatggccaaggccatgagaagctgctcgaggcccgtaacatg
ctgctgggcatggcgtcgcagaatcctaatctggtgggtgtgcgtccaaacggtcaggaa
gatgcgcctatgtatcgcatccatatcgaccacgccaagcttcgcgccctgagtatcgat
atcgacgcggttaacagcgtgctggggactgcctggggtggtagctatgtgaacgacttc
atcgaccgtggtcgtgtgaagaaggtctacgtacagggcgatgcccagtaccgtatgcag
ccggaagacctcgatacctggtatgtacgtaacagccagggtgagatggtgcctttctcg
gcctttgccacaggtacctgggaatatggttcgccgcgtctagagcgtttcaacggtctg
cctgcgatgaacatccagggcggtacggcacaaggttatagtacgggtgcggccatggcc
gacatcgaggccatggtagccaagttaccgccaggattcggcgtcgagtggaacggcctg
tcatacgaggaacgtctctcgggtaaccaggcgccggcgctttatgccctgtctatcatg
gtggtcttcctggtattggcggccctgtatgagagctggtctgtgccgttcgcggtgatc
ttggtagtgccattggggatcatcggtgccttgctggcgatgaatggtcgtggcctgcct
aacgacgtgttcttccaggtgggtctgttgactaccgtaggtctggcgaccaagaacgcc
atcctgatcgtcgaattcgccaaagagttctacgagaagggcgcgggtctggtggaagcg
accctgcacgcggtgcgtgtgcgtctgcgtcctatcttgatgacctcgttggccttcggt
ctgggtgttgtacccctggccatcagctcgggcgttggctcgggtagccagaatgcaatc
ggtaccggcgtattgggcggcatgatgagttcgaccttcctggggatcttctttatccct
atcttcttcgtgatcgtcgagcgtatcttcagcaagcgcgagaagaagggcgccgcaact
caggctgccgattcgacaccacaagaatag
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