Shewanella rhizosphaerae: K0I63_05900
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Entry
K0I63_05900 CDS
T09262
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs01501
beta-Lactam resistance
srhs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_05900
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I63_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srhs03036
]
K0I63_05900
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_05900
01504 Antimicrobial resistance genes [BR:
srhs01504
]
K0I63_05900
Chromosome and associated proteins [BR:
srhs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0I63_05900
Transporters [BR:
srhs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0I63_05900
Antimicrobial resistance genes [BR:
srhs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I63_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
BSH_CusB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QYK14048
LinkDB
All DBs
Position
1316115..1317272
Genome browser
AA seq
385 aa
AA seq
DB search
MLGRNASPLARLTLFSAALLLAACGKAPAPGPAVMPSVIVNTAQVKEIRAKTEIVGRTRA
SEDVVIKSQIQGQLLKRTFVEGEDIDAGELLFEIDPSTFEAELAQQQAVLKQAIASRDVA
VMNWERGRRLLPDGMISAQDMDELTSRKLTTAAGVVQAEAAVKAAELQLSYTKVYAPISG
RISGAKVSQGDIITPQSELASLVQLQPMWVNFQVAEKTIISAKQNFSKAAKHEVKISDIV
IRLRLPNGTMFDETGYIDFISNRVDAATGTLELRATFNNESKLMLPGLFVTLVIESPISE
QAILIPQAAVQEDQQGRFVMVLDGDNKVQKRVVELGDRFGVDWRVLSGLNEGERIVVDGL
QKIRPGIEVKAVEQQAVPFQEANDA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcttggtagaaacgcttcacctctcgctcgactcaccctgtttagcgcggcgctgctg
ctcgcggcttgcggcaaggcgccggcccctgggcccgccgttatgcccagcgtgatagtt
aacaccgcccaggttaaggagatccgcgccaagacggagatcgtcggtcgcacccgggca
tcggaagatgtggtgatcaagtcgcagatccagggacaactccttaagcgcacctttgtc
gagggggaagacatagatgccggcgagctgctgtttgagatagacccctccaccttcgag
gccgagctggcgcagcaacaggcggtgctcaagcaggccatcgcctctcgcgatgttgct
gtgatgaactgggagcgtggccgtcgcctgctacccgatggcatgatcagcgcccaggac
atggatgagcttaccagtcgtaagctgaccacggcagcgggtgtggtgcaggccgaagcg
gcggtgaaggccgccgagttgcagctcagctataccaaggtttacgcgcctatctcgggc
cgtatcagcggcgccaaggtgagccagggggatatcatcacgcctcagtctgagctggcc
agcctggtgcagttgcagcccatgtgggttaacttccaggttgccgagaagaccatcatc
tccgccaaacagaacttttccaaggccgccaaacatgaggtgaagatctcggatatcgtg
atccgcctgcgcctgcccaacggcaccatgttcgacgagacagggtatatcgactttatc
agcaatagggtcgatgccgccaccggcaccctggagctcagggccaccttcaacaatgag
agcaagctgatgctgcccgggctgtttgtgactctggttatcgagtcccccattagcgag
caggccatcttaattccacaggcggcggtgcaggaagatcagcagggacgtttcgtcatg
gtgctggatggtgacaacaaggtgcagaagcgggtggtcgaactgggtgacagattcggc
gtcgactggcgcgtgctcagtggcctcaacgagggtgaacgtatcgtggtggatggtctg
cagaagatccgtccgggtatcgaggtgaaggccgtcgagcagcaggcggtgcctttccaa
gaagctaacgatgcctaa
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integrated database retrieval system
